RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 EGLN3Q9H6Z9 239 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 KMT2EQ8IZD2 1858 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 A0A075B6Q4 140 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 CDRT1O95170 752 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 PHC2Q8IXK0 858 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 EXD3Q8N9H8 876 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR51G2Q8NGK0 314 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 SIGLEC12Q96PQ1 595 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC30A2Q9BRI3 323 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR52D1Q9H346 318 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 INPP5EQ9NRR6 644 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 V9GYH0 126 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 LAMA1P25391 3075 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 CTDSP2O14595 271 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 TACSTD2P09758 323 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 SIRPAP78324 504 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 PLAURQ03405 335 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 CAMK2BQ13554 666 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ENKURQ8TC29 256 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ST8SIA1Q92185 356 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ERMAPQ96PL5 475 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 KCNS3Q9BQ31 491 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 LRRTM2O43300 516 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 TBX1O43435 398 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 TSPAN2O60636 221 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 IFI6P09912 130 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 CPOQ8IVL8 374 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR6K6Q8NGW6 343 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 FBXL2Q9UKC9 423 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZMIZ1Q9ULJ6 1067 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 TLN1Q9Y490 2541 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ANKUB1A6NFN9 424 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 A8MVM7 634 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 SSX4O60224 188 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 APOBEC1P41238 236 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TGM4P49221 684 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CTXN1P60606 82 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 MXD1Q05195 221 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TAF13Q15543 124 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TAB1Q15750 504 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF141Q15928 474 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TBR1Q16650 682 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF517Q6ZMY9 492 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 UEVLDQ8IX04 471 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 FN3KQ9H479 309 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 PAIP2BQ9ULR5 123 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC35F4A4IF30 521 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CXCL13O43927 109 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CD79BP40259 229 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 RBM34P42696 430 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CIB4A0PJX0 185 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TO15178 435 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 PRPS1P60891 318 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 Q0VFX4 171 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 SELENBP1Q13228 472 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF79Q15937 498 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 GXYLT1Q4G148 440 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 C1orf140Q5VVS0 124 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 KLHL24Q6TFL4 600 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 LHFPL3Q86UP9 236 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 KDM8Q8N371 416 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CLDN22Q8N7P3 220 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF671Q8TAW3 534 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM203Q969S6 136 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 MRGPRX4Q96LA9 322 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 RBP7Q96R05 134 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 DNAJB12Q9NXW2 375 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF223Q9UK11 482 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 CLEC4AQ9UMR7 237 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TRAPPC4Q9Y296 219 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
SYNGAP1-207ENST00000628646 TRAV27A0A087WT01 109 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF670-ZNF695F2Z2N8 137 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CHP2O43745 196 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 ONECUT2O95948 504 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CPEP16870 476 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CELP19835 753 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 TOMM34Q15785 309 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 PNPLA2Q96AD5 504 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 FGF20Q9NP95 211 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 DDX28Q9NUL7 540 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 GPR52Q9Y2T5 361 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 KDM4EB2RXH2 506 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 K7ENP7 123 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARHGEF9O43307 516 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARL6IP5O75915 188 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms