RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TRIM43Q96BQ3 446 aaPredicted RBP17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 TAS2R8Q9NYW2 309 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 MOKQ9UQ07 419 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 HRH3Q9Y5N1 445 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 C2orf16Q68DN1 1984 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 SPDEFO95238 335 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 WDPCPO95876 746 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 CCL5P13501 91 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 GMFBP60983 142 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 SORDQ00796 357 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF141Q15928 474 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 YOD1Q5VVQ6 348 aaPredicted RBP17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ANKRD16Q6P6B7 361 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 OR10AC1Q8NH08 325 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 STK35Q8TDR2 534 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 TNFAIP8L1Q8WVP5 186 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ADAD1Q96M93 576 aaKnown RBP17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ZFYVE21Q9BQ24 234 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 TWSG1Q9GZX9 223 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 MFFQ9GZY8 342 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 APMAPQ9HDC9 416 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 NPIPB9F8W1W9 429 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 CTAG2O75638 210 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 GUSBP08236 651 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 S1PR1P21453 382 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 CSF2RBP32927 897 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 BIVMQ86UB2 503 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 PELOQ9BRX2 385 aaKnown RBP17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 CHST6Q9GZX3 395 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 TMEM138Q9NPI0 162 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 IFT46Q9NQC8 304 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 TBC1D3IA0A087WXS9 549 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 OR4C45A6NMZ5 311 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 FOXS1O43638 330 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 NDUFA2O43678 99 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 AKAIN1P0CW23 69 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 GJA4P35212 333 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC25A1P53007 311 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 ADPRHP54922 357 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 NKAIN2Q5VXU1 208 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 OR10G6Q8NH81 332 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 OR14C36Q8NHC7 312 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 CCL4L1Q8NHW4 92 aa17.81■□□□□ 0.44
PDLIM3-212ENST00000620787 FANCMQ8IYD8 2048 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 MEIS3P1A6NDR6 274 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF254O75437 659 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 GTF2F2P13984 249 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 MST1P26927 711 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 PRPS1P60891 318 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 FAM122BQ7Z309 247 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 SPRED2Q7Z698 418 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 KRT77Q7Z794 578 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 CDC20BQ86Y33 519 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 RELL2Q8NC24 303 aaPredicted RBP17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 OR1E3Q8WZA6 343 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 FAM3CQ92520 227 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 RERGQ96A58 199 aaPredicted RBP17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC38A3Q99624 504 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 ACTR10Q9NZ32 417 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 IGKV1D-42A0A075B6H8 117 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 TRAV14DV4A0A0A6YYC5 116 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 DNASE2O00115 360 aaPredicted RBP17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 FKTNO75072 461 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 AQP2P41181 271 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 JAZF1Q86VZ6 243 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 OR51D1Q8NGF3 324 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 OR51A4Q8NGJ6 313 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 OR8K3Q8NH51 312 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF417Q8TAU3 575 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 TMEM106AQ96A25 262 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 C3orf49Q96BT1 292 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC25A32Q9H2D1 315 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 DTX4Q9Y2E6 619 aa17.8■□□□□ 0.44
PDLIM3-212ENST00000620787 RFPL4AA6NLU0 287 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 EFCAB7A8K855 629 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 RFPL4AL1F8VTS6 287 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC31A1O15431 190 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 CDC123O75794 336 aaPredicted RBP17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 APOC3P02656 99 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC35E2P0CK97 266 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 PVRP15151 417 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 DMWDQ09019 674 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNHIT3Q15649 155 aaPredicted RBP17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 C11orf88Q6PI97 169 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 OR2G2Q8NGZ5 317 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 RSC1A1Q92681 617 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 PBX4Q9BYU1 374 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 BLOC1S5-TXNDC5H3BN57 136 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 H3BSH0 61 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 DCTN6O00399 190 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 PLRG1O43660 514 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 OR10H2O60403 315 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 KDM4BO94953 1096 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 CD3DP04234 171 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 LSSP48449 732 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 ENPP2Q13822 863 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 NPSR1Q6W5P4 371 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 LRRC75AQ8NAA5 344 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 OR10Z1Q8NGY1 313 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms