RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PAGE3Q5JUK9 113 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 FAM120AOSQ5T036 256 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 INTS11Q5TA45 600 aaKnown RBP10.31□□□□□ -0.76
UPF3B-204ENST00000619445 PIWIL3Q7Z3Z3 882 aaKnown RBP10.31□□□□□ -0.76
UPF3B-204ENST00000619445 PATL1Q86TB9 770 aaKnown RBP10.31□□□□□ -0.76
UPF3B-204ENST00000619445 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 OR5J2Q8NH18 312 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 UBASH3BQ8TF42 649 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 CKAP2Q8WWK9 683 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 ZBTB9Q96C00 473 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 MPP4Q96JB8 637 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 SIKE1Q9BRV8 207 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 SLC19A3Q9BZV2 496 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 BPESC1Q9GZL8 116 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 NOX3Q9HBY0 568 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 SLC52A3Q9NQ40 469 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 B3GNT2Q9NY97 397 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 SEC14L4Q9UDX3 406 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 GPR160Q9UJ42 338 aa10.31□□□□□ -0.76
UPF3B-204ENST00000619445 IGHV4-61A0A0C4DH41 118 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 SLC22A23A1A5C7 686 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 M0R233 179 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 PLPP3O14495 311 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 ANGPT2O15123 496 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 TPST1O60507 370 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 MFN2O95140 757 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
UPF3B-204ENST00000619445 CD79AP11912 226 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 AHCYP23526 432 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 IGFBP5P24593 272 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 GLRXP35754 106 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 CDH12P55289 794 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 PCBP3P57721 371 aaKnown RBP10.3□□□□□ -0.76
UPF3B-204ENST00000619445 ADRM1Q16186 407 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 LIPNQ5VXI9 398 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 HDDC2Q7Z4H3 204 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 SVOPLQ8N434 492 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 DPP10Q8N608 796 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
UPF3B-204ENST00000619445 ATP6V1G3Q96LB4 118 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 MCHR1Q99705 422 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 FOXB1Q99853 325 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 EBF4Q9BQW3 602 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 CPPED1Q9BRF8 314 aaPredicted RBP10.3□□□□□ -0.76
UPF3B-204ENST00000619445 C1orf198Q9H425 327 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 SLCO1B3Q9NPD5 702 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 SLAMF8Q9P0V8 285 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 ZNF346Q9UL40 294 aaKnown RBP10.3□□□□□ -0.76
UPF3B-204ENST00000619445 NDUFAF1Q9Y375 327 aa10.3□□□□□ -0.76
UPF3B-204ENST00000619445 HPRP00739 348 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 PTHP01270 115 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 HLA-HP01893 362 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 HIST1H2ABP04908 130 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 CELA3BP08861 270 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ADORA3P0DMS8 318 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 IFNGR1P15260 489 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ZNF14P17017 642 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 CBLP22681 906 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 AQP1P29972 269 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 SELENOVP59797 346 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 MRPS11P82912 194 aaKnown RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ZP4Q12836 540 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 SCGB2A2Q13296 93 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 CAMK2DQ13557 499 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 MMEL1Q495T6 779 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 NRN1LQ496H8 165 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 GLIPR1L2Q4G1C9 344 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 RUNDC3AQ59EK9 446 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 GKAP1Q5VSY0 366 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 CARD17Q5XLA6 110 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 TTC33Q6PID6 262 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 DLEU7Q6UYE1 221 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 HIST3H2AQ7L7L0 130 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 DHDDSQ86SQ9 333 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 LINC01356Q8N9X3 169 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 HIST1H2ACQ93077 130 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ZNF837Q96EG3 531 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ARHGDIGQ99819 225 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 EMC6Q9BV81 110 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 SEC61A2Q9H9S3 476 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 NANSQ9NR45 359 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 STX18Q9P2W9 335 aaKnown RBP10.29□□□□□ -0.76
UPF3B-204ENST00000619445 SLC7A8Q9UHI5 535 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 ZNF229Q9UJW7 825 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 NBEAL1Q6ZS30 2694 aa10.29□□□□□ -0.76
UPF3B-204ENST00000619445 TMEM129A0AVI4 362 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 TRAPPC13A5PLN9 417 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 CENPBD1B2RD01 187 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 ADRA2AP08913 450 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 ZNF35P13682 527 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 HLA-DOBP13765 273 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 B4GALT1P15291 398 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 APEX1P27695 318 aaKnown RBP10.28□□□□□ -0.76
UPF3B-204ENST00000619445 PTDSS1P48651 473 aaKnown RBP10.28□□□□□ -0.76
UPF3B-204ENST00000619445 RAB1AP62820 205 aa10.28□□□□□ -0.76
UPF3B-204ENST00000619445 RIN1Q13671 783 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms