RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IL7RP16871 459 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF708P17019 499 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 PRKCAP17252 672 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TNFRSF1BP20333 461 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GSTM3P21266 225 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GALP22466 123 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CFL1P23528 166 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CTSSP25774 331 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 PSMB9P28065 219 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 OPRL1P41146 370 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 HTR3AP46098 478 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC6A8P48029 635 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 KCNJ5P48544 419 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 RGS6P49758 472 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ASCL1P50553 236 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 P2RX1P51575 399 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CCR4P51679 360 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF41P51814 821 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CRISP1P54107 249 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 UGT2B15P54855 530 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 RAC1P63000 192 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 RUNX1T1Q06455 604 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TFF3Q07654 80 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 PMPCAQ10713 525 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 C1DQ13901 141 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 IRF3Q14653 427 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SPCS2Q15005 226 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TOMM20Q15388 145 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 OCLNQ16625 522 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TIGD6Q17RP2 521 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ACSF3Q4G176 576 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 KLHL22Q53GT1 634 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF311Q5JNZ3 666 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM201Q5SNT2 666 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 RAET1LQ5VY80 246 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF585AQ6P3V2 769 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 METAP1DQ6UB28 335 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ESPNLQ6ZVH7 1005 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC46A3Q7Z3Q1 461 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TSEN54Q7Z6J9 526 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM179BQ7Z7N9 219 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ADGRG3Q86Y34 549 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GRAMD2AQ8IUY3 354 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 PEX5LQ8IYB4 626 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ENTHD1Q8IYW4 607 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC43A2Q8N370 569 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 FAM86B1Q8N7N1 296 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 PROKR2Q8NFJ6 384 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 OR10G2Q8NGC3 310 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 OR4C15Q8NGM1 316 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 OR8J1Q8NGP2 316 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC25A43Q8WUT9 341 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM234Q8WY98 164 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ST8SIA1Q92185 356 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GGHQ92820 318 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 NINJ1Q92982 152 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 RNASE6Q93091 150 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 MARVELD3Q96A59 401 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TXNDC15Q96J42 360 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SFXN2Q96NB2 322 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 FEVQ99581 238 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ARHGDIGQ99819 225 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 NAA50Q9GZZ1 169 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ADAM19Q9H013 955 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 DCSTAMPQ9H295 470 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ANKRD19PQ9H560 264 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM185BQ9H7F4 350 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 EXOSC3Q9NQT5 275 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ACER3Q9NUN7 267 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 MRPS18AQ9NVS2 196 aaKnown RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ELOVL5Q9NYP7 299 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 NDUFAF4Q9P032 175 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ERVK-18Q9QC07 812 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 METRNQ9UJH8 293 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC35A3Q9Y2D2 325 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 IFT52Q9Y366 437 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TESMINQ9Y4I5 508 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 MAGED1Q9Y5V3 778 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 LYVE1Q9Y5Y7 322 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SPIN1Q9Y657 262 aaPredicted RBP4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ENPP4Q9Y6X5 453 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 U3KQV3 271 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 V9GYQ6 96 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TEP1Q99973 2627 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 IGKV1D-42A0A075B6H8 117 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 A0A1B0GWA3 101 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 A0A1W2PNR3 127 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ZC3H12DA2A288 527 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 METTL15A6NJ78 407 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ZAR1LA6NP61 321 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 H3BML4 177 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 M0R3H8 397 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MSTNO14793 375 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 XPNPEP2O43895 674 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 WBP4O75554 376 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CNOT4O95628 575 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 TGM6O95932 706 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MT-ND1P03886 318 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 SCG5P05408 212 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CD8BP10966 210 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms