RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 WDFY1Q8IWB7 410 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 PGAM4Q8N0Y7 254 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 FAM156AQ8NDB6 213 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 SGTBQ96EQ0 304 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 Q96MF0 132 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 NELFAQ9H3P2 528 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 CRLF2Q9HC73 371 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 RPS6KA6Q9UK32 745 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 POU2F3Q9UKI9 436 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 LAMP3Q9UQV4 416 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 MED31Q9Y3C7 131 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 COL6A5A8TX70 2615 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 TRIM64A6NGJ6 449 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TRIM64BA6NI03 449 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ZNF726A6NNF4 738 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 RPL36A-HNRNPH2H7BZ11 118 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 OR7A10O76100 309 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TCN1P20061 433 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-228ENST00000618469 BIDP55957 195 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TUBA1BP68363 451 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TUBA4AP68366 448 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ARF1P84077 181 aaKnown RBP13.97□□□□□ -0.17
BRCA1-228ENST00000618469 RPL18Q07020 188 aaKnown RBP13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ANKRD16Q6P6B7 361 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 SLC22A25Q6T423 547 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TUBA1AQ71U36 451 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 SLC35D2Q76EJ3 337 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 C20orf196Q8IYI0 205 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ANKS4BQ8N8V4 417 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 OR6N1Q8NGY5 312 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 BCL2L2Q92843 193 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ZNF837Q96EG3 531 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-228ENST00000618469 COX4I2Q96KJ9 171 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 HS6ST2Q96MM7 605 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 FNDC11Q9BVV2 318 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 ULBP2Q9BZM5 246 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 CXorf56Q9H5V9 222 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 OBP2BQ9NPH6 170 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 B3GAT2Q9NPZ5 323 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 MAN2C1Q9NTJ4 1040 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 TAS2R5Q9NYW4 299 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 MGAT4BQ9UQ53 548 aa13.97□□□□□ -0.17
BRCA1-228ENST00000618469 CADP27708 2225 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 BLOC1S5-TXNDC5H3BN57 136 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 GMNNO75496 209 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 FAM107AO95990 144 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 FUT4P22083 530 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 CSNK1A1P48729 337 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 RPS4XP62701 263 aaKnown RBP13.96□□□□□ -0.17
BRCA1-228ENST00000618469 ZP4Q12836 540 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 C1QTNF12Q5T7M4 302 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 SHEQ5VZ18 495 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 GLYATQ6IB77 296 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 C16orf89Q6UX73 402 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 NHLRC1Q6VVB1 395 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 LRRC75A-AS1Q8N1F1 130 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 SMAP2Q8WU79 429 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-228ENST00000618469 IGFBPL1Q8WX77 278 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 BOD1Q96IK1 185 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 RADILQ96JH8 1075 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 ADAD1Q96M93 576 aaKnown RBP13.96□□□□□ -0.17
BRCA1-228ENST00000618469 NDE1Q9NXR1 346 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 CISD1Q9NZ45 108 aaKnown RBP13.96□□□□□ -0.17
BRCA1-228ENST00000618469 SAMD4AQ9UPU9 718 aaKnown RBP13.96□□□□□ -0.17
BRCA1-228ENST00000618469 V9GYQ6 96 aa13.96□□□□□ -0.17
BRCA1-228ENST00000618469 ARPC4-TTLL3A0A0A6YYG9 625 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF99A8MXY4 864 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-228ENST00000618469 MCIDASD6RGH6 385 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 ATP6V1G2-DDX39BF2Z307 99 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 FFAR1O14842 300 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 IGF2P01344 180 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 F13BP05160 661 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 SOD3P08294 240 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 IFI30P13284 250 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 HSD17B1P14061 328 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 FUT1P19526 365 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 PTH2RP49190 550 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 LSM11P83369 360 aaKnown RBP eCLIP13.95□□□□□ -0.18
BRCA1-228ENST00000618469 PPP2R2BQ00005 443 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 TRAM2Q15035 370 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 SAMD4BQ5PRF9 694 aaKnown RBP13.95□□□□□ -0.18
BRCA1-228ENST00000618469 B3GLCTQ6Y288 498 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 CYP4Z1Q86W10 505 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 NRMQ8IXM6 262 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 DEFB107AQ8IZN7 70 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 FITM2Q8N6M3 262 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 FAM86B1Q8N7N1 296 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 MAGEE2Q8TD90 523 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-228ENST00000618469 LRR1Q96L50 414 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 MAGEL2Q9UJ55 1249 aa13.95□□□□□ -0.18
BRCA1-228ENST00000618469 HIVEP2P31629 2446 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 ZANQ9Y493 2812 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 IGHV1-18A0A0C4DH31 117 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 A0A1W2PRG6 482 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 FAM171A2A8MVW0 826 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 PRSS23O95084 383 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 DANCRP0C864 163 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 SAGP10523 405 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms