RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OPN1LWP04000 364 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 F13BP05160 661 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 CPN1P15169 458 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF3P17036 446 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 NOS3P29474 1203 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 STARP49675 285 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 DAP3P51398 398 aaKnown RBP10.2□□□□□ -0.78
SLIRP-212ENST00000613856 SUCLG1P53597 346 aaKnown RBP10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ERVK-25P63136 954 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 CSNK2BP67870 215 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 TESK1Q15569 626 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 MS4A18Q3C1V0 323 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 KCTD21Q4G0X4 260 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 FAM205BPQ63HN1 556 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ABLIM2Q6H8Q1 611 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF295-AS1Q8N0V1 137 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF786Q8N393 782 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 TMEM99Q8N816 258 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 OR10D3Q8NH80 312 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF519Q8TB69 540 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ITLN2Q8WWU7 325 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-212ENST00000613856 UBE2FQ969M7 185 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 DNHD1Q96M86 4753 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 Q96MT0 163 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 TSPAN32Q96QS1 320 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 SRXN1Q9BYN0 137 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 DEFB127Q9H1M4 99 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 TXNIPQ9H3M7 391 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 LDAHQ9H6V9 325 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 RASSF1Q9NS23 344 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 PLCXD1Q9NUJ7 323 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 CLN6Q9NWW5 311 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 B3GAT1Q9P2W7 334 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 SPRR3Q9UBC9 169 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 BLOC1S6Q9UL45 172 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 MYRFQ9Y2G1 1151 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 ADAM18Q9Y3Q7 739 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 IER3IP1Q9Y5U9 82 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 TEX13CA0A0J9YWL9 993 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 A0A1W2PRG6 482 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF814B7Z6K7 855 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 C11orf98E9PRG8 122 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 H0YC42 278 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 SMAD9O15198 467 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 TLX2O43763 284 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 CXCL13O43927 109 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 HIST1H1CP16403 213 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 AHCYP23526 432 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 CARD18P57730 90 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 GABARAPL2P60520 117 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 RPS3AP61247 264 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 RPL27P61353 136 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 HSF1Q00613 529 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 KRR1Q13601 381 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 CDSNQ15517 529 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 ACKR1Q16570 336 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 KRTAP21-3Q3LHN1 58 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF362Q5T0B9 420 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 AADACL4Q5VUY2 407 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 NXNL2Q5VZ03 156 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 NHLRC1Q6VVB1 395 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 HDDC2Q7Z4H3 204 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 ADCK1Q86TW2 530 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 UEVLDQ8IX04 471 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 UBQLNLQ8IYU4 475 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 SLC37A3Q8NCC5 494 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 RELTQ969Z4 430 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 LRR1Q96L50 414 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 Q96M85 177 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 OXGR1Q96P68 337 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 IL4I1Q96RQ9 567 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 SF3B5Q9BWJ5 86 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 EXO5Q9H790 373 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 HINT3Q9NQE9 182 aaKnown RBP10.19□□□□□ -0.78
SLIRP-212ENST00000613856 GRHPRQ9UBQ7 328 aa10.19□□□□□ -0.78
SLIRP-212ENST00000613856 MAGEA13PA6NCF6 341 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 OR14I1A6ND48 311 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 A6NIZ1 184 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SNTNA6NMZ2 147 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 NPIPA5E9PKD4 350 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 C19orf84I3L1E1 186 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 PRODHO43272 600 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 TRAF3IP2O43734 574 aaPredicted RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ENTPD6O75354 484 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SLC2A10O95528 541 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 LYNP07948 512 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 STSP08842 583 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 PAICSP22234 425 aaKnown RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ENPP1P22413 925 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 CRHBPP24387 322 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 FMO3P31513 532 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 EIF1AXP47813 144 aaKnown RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SLC16A1P53985 500 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 PER3P56645 1201 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 RAP1BP61224 184 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 RAP1AP62834 184 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 POU3F1Q03052 451 aaPredicted RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 CRMP1Q14194 572 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms