RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 DEFB108BQ8NET1 73 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 SYNPRQ8TBG9 265 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 ST7LQ8TDW4 575 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 TMIGD2Q96BF3 282 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 TRIM44Q96DX7 344 aaPredicted RBP8.61□□□□□ -1.03
TRIM28-210ENST00000597618 ELMOD3Q96FG2 381 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 LRR1Q96L50 414 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 MECRQ9BV79 373 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF224Q9NZL3 707 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 SEC14L4Q9UDX3 406 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 TESQ9UGI8 421 aaKnown RBP8.61□□□□□ -1.03
TRIM28-210ENST00000597618 PURGQ9UJV8 347 aaKnown RBP8.61□□□□□ -1.03
TRIM28-210ENST00000597618 AUP1Q9Y679 476 aa8.61□□□□□ -1.03
TRIM28-210ENST00000597618 ISPDA4D126 451 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 M0R082 166 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 OR2T1O43869 369 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ENTPD5O75356 428 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 CLPTM1O96005 669 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 KNG1P01042 644 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 SERPINA5P05154 406 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF250P15622 560 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ALDH3A1P30838 453 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ARRB2P32121 409 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 SERPINB5P36952 375 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 EGR4Q05215 589 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 SLC3A1Q07837 685 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 CASP8Q14790 479 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 RAB39AQ14964 217 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 LARS2Q15031 903 aaKnown RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 MOGQ16653 247 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 DPY19L1Q2PZI1 675 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 KLF17Q5JT82 389 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 FAM209AQ5JX71 171 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 FAM69AQ5T7M9 428 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 C5orf46Q6UWT4 87 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 H1FNTQ75WM6 255 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 SPATC1Q76KD6 591 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF771Q7L3S4 317 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 VRK2Q86Y07 508 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF584Q8IVC4 421 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 UEVLDQ8IX04 471 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 GLB1L3Q8NCI6 653 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ADPRHL1Q8NDY3 354 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 CPEB3Q8NE35 698 aaKnown RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 OR52P1PQ8NH57 321 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF417Q8TAU3 575 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF519Q8TB69 540 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 C11orf40Q8WZ69 217 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 TESCQ96BS2 214 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 KTI12Q96EK9 354 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF48Q96MX3 618 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 TSPAN32Q96QS1 320 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 CCT8L2Q96SF2 557 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF587Q96SQ5 575 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 FOXB1Q99853 325 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 MRI1Q9BV20 369 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ULBP2Q9BZM5 246 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ARMC7Q9H6L4 198 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 PDP1Q9P0J1 537 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 LEF1Q9UJU2 399 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF443Q9Y2A4 671 aaPredicted RBP8.6□□□□□ -1.03
TRIM28-210ENST00000597618 CACNG2Q9Y698 323 aa8.6□□□□□ -1.03
TRIM28-210ENST00000597618 TIMM23O14925 209 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 ALX3O95076 343 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 IGHMP01871 453 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 LCKP06239 509 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 PRG2P13727 222 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 DRD4P21917 467 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 GRPRP30550 384 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 MTNR1AP48039 350 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 CLNS1AP54105 237 aaKnown RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 AQP5P55064 265 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 RBBP4Q09028 425 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 ZNF154Q13106 437 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 TSTQ16762 297 aaKnown RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 LRRC34Q8IZ02 419 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 BCL6BQ8N143 479 aaPredicted RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 C4orf33Q8N1A6 199 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 SLC30A7Q8NEW0 376 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 OR6N1Q8NGY5 312 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 PNPT1Q8TCS8 783 aaKnown RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 CCL17Q92583 94 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 CCDC115Q96NT0 180 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 ZIM3Q96PE6 472 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 MS4A7Q9GZW8 240 aaPredicted RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 C1orf198Q9H425 327 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 PPCSQ9HAB8 311 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 CACYBPQ9HB71 228 aaKnown RBP8.59□□□□□ -1.03
TRIM28-210ENST00000597618 CALML5Q9NZT1 146 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 P2RX2Q9UBL9 471 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 BTNL2Q9UIR0 455 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 RYR3Q15413 4870 aa8.59□□□□□ -1.03
TRIM28-210ENST00000597618 TRAV36DV7A0A075B6V5 113 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms