RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 C10orf53Q8N6V4 93 aa18.78■□□□□ 0.6
DDX39A-215ENST00000590696 TPK1Q9H3S4 243 aa18.78■□□□□ 0.6
DDX39A-215ENST00000590696 MRPL39Q9NYK5 338 aaKnown RBP18.78■□□□□ 0.6
DDX39A-215ENST00000590696 NOX1Q9Y5S8 564 aa18.78■□□□□ 0.6
DDX39A-215ENST00000590696 ZNF726A6NNF4 738 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 EVPLLA8MZ36 301 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 LYNX1G3V0Z9 82 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 SERPINB7O75635 380 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 LYNX1P0DP58 116 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 GPX2P18283 190 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 APEX1P27695 318 aaKnown RBP18.77■□□□□ 0.6
DDX39A-215ENST00000590696 CDH12P55289 794 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 PUDPQ08623 228 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 SQLEQ14534 574 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 ZNF627Q7L945 461 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 ARMC8Q8IUR7 673 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 BHLHE22Q8NFJ8 381 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-215ENST00000590696 OR6N1Q8NGY5 312 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 ZNF75AQ96N20 296 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 SNX18Q96RF0 628 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 CCDC28BQ9BUN5 200 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 MRPL37Q9BZE1 423 aaKnown RBP18.77■□□□□ 0.6
DDX39A-215ENST00000590696 ULBP2Q9BZM5 246 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 SLCO1B3Q9NPD5 702 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-215ENST00000590696 CORO2BQ9UQ03 480 aa18.77■□□□□ 0.6
DDX39A-215ENST00000590696 PLPP3O14495 311 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 SERPINI2O75830 405 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 IFNGR1P15260 489 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 B4GALT1P15291 398 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 ZNF14P17017 642 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-215ENST00000590696 AHCYP23526 432 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 RIN1Q13671 783 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 TRIP10Q15642 601 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 MSMPQ1L6U9 139 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 AGKQ53H12 422 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 RANBP3LQ86VV4 465 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-215ENST00000590696 HIPK4Q8NE63 616 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 HPS1Q92902 700 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 MRPL24Q96A35 216 aaKnown RBP18.76■□□□□ 0.59
DDX39A-215ENST00000590696 TMEM43Q9BTV4 400 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 SPEF1Q9Y4P9 236 aa18.76■□□□□ 0.59
DDX39A-215ENST00000590696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■■■■ 33.6
DDX39A-215ENST00000590696 ERLIN1O75477 346 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 MFN2O95140 757 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 ZNF35P13682 527 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 PTDSS1P48651 473 aaKnown RBP18.75■□□□□ 0.59
DDX39A-215ENST00000590696 EVX1P49640 407 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 RAB1AP62820 205 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 TRMT5Q32P41 509 aaKnown RBP18.75■□□□□ 0.59
DDX39A-215ENST00000590696 BEND6Q5SZJ8 279 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-215ENST00000590696 PXKQ7Z7A4 578 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 SNX32Q86XE0 403 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 LINC01356Q8N9X3 169 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 SMYD1Q8NB12 490 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 LRRC8CQ8TDW0 803 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 MCHR1Q99705 422 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 FOXB1Q99853 325 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 EVA1AQ9H8M9 152 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 ZNF224Q9NZL3 707 aa18.75■□□□□ 0.59
DDX39A-215ENST00000590696 C11orf98E9PRG8 122 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 SYNGR3O43761 229 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 RAB36O95755 333 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 GIPRP48546 466 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 SWT1Q5T5J6 900 aaKnown RBP18.74■□□□□ 0.59
DDX39A-215ENST00000590696 OR5J2Q8NH18 312 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 CPPED1Q9BRF8 314 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-215ENST00000590696 DENND2DQ9H6A0 471 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-215ENST00000590696 REV1Q9UBZ9 1251 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 TMEFF2Q9UIK5 374 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-215ENST00000590696 ANGPT4Q9Y264 503 aa18.74■□□□□ 0.59
DDX39A-215ENST00000590696 M0R233 179 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 M0R3H8 397 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 ADORA3P0DMS8 318 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 GLRXP35754 106 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 CSNK1A1P48729 337 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 ATP4BP51164 291 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 BIDP55957 195 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 RUNDC3AQ59EK9 446 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 AGBL2Q5U5Z8 902 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 GKAP1Q5VSY0 366 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-215ENST00000590696 LIPNQ5VXI9 398 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 DLEU7Q6UYE1 221 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 LINC00114Q6XXX2 140 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 SYT3Q9BQG1 590 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 MS4A5Q9H3V2 200 aa18.73■□□□□ 0.59
DDX39A-215ENST00000590696 UBL3O95164 117 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 MT-ATP6P00846 226 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 TCN1P20061 433 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-215ENST00000590696 ALDH3B1P43353 468 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 CDH15P55291 814 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 GALK2Q01415 458 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 CCNIQ14094 377 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 RAB39AQ14964 217 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 DUSP7Q16829 419 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 ELFN2Q5R3F8 820 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 ZNF613Q6PF04 617 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 LRP11Q86VZ4 500 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 PTOV1Q86YD1 416 aa18.72■□□□□ 0.59
DDX39A-215ENST00000590696 C1orf159Q96HA4 380 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms