RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KDELR2P33947 212 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ACVR1BP36896 505 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 CSNK1A1P48729 337 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 NUDT6P53370 316 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 TUBA1BP68363 451 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 TUBA4AP68366 448 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ZP4Q12836 540 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 CAMK2DQ13557 499 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 B3GLCTQ6Y288 498 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 TUBA1AQ71U36 451 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 POU5F2Q8N7G0 328 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 CRNNQ9UBG3 495 aaPredicted RBP10.79□□□□□ -0.68
SS18-225ENST00000585121 USP22Q9UPT9 525 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 GSTA4O15217 222 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 SSX4O60224 188 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 LYPD3O95274 346 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 THY1P04216 161 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 THRBP10828 461 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 IFNGR1P15260 489 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ARR3P36575 388 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 RBM34P42696 430 aaKnown RBP10.79□□□□□ -0.68
SS18-225ENST00000585121 BIDP55957 195 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 DSCR9P59020 149 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 C11orf71Q6IPW1 123 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 WDR88Q6ZMY6 472 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ZNF813Q6ZN06 617 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 SLC35D2Q76EJ3 337 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 NANOGNBQ7Z5D8 188 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 NANOS1Q8WY41 292 aaKnown RBP10.79□□□□□ -0.68
SS18-225ENST00000585121 TPD52L3Q96J77 140 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 HOPXQ9BPY8 73 aaPredicted RBP10.79□□□□□ -0.68
SS18-225ENST00000585121 RHNO1Q9BSD3 238 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 EFCAB1Q9HAE3 211 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 RIMS3Q9UJD0 308 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 GDF2Q9UK05 429 aaPredicted RBP10.79□□□□□ -0.68
SS18-225ENST00000585121 CSPG4Q6UVK1 2322 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 BLOC1S5-TXNDC5H3BN57 136 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 H7C417 338 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 NDUFS7O75251 213 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 DCTN3O75935 186 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 IGKV3-15P01624 115 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 MT-ND1P03886 318 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 CECR9P0C854 216 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 TNFRSF1BP20333 461 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 CRYBA2P53672 197 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 SNRPD2P62316 118 aaKnown RBP10.78□□□□□ -0.68
SS18-225ENST00000585121 PPP2R2BQ00005 443 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 NAAAQ02083 359 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 NPRL3Q12980 569 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 CLEC2AQ6UVW9 174 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 OR6X1Q8NH79 312 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 TMEM239Q8WW34 195 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 CMTM5Q96DZ9 223 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 FBXO17Q96EF6 278 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
SS18-225ENST00000585121 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 ZNF426Q9BUY5 554 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 REG4Q9BYZ8 158 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 NELFAQ9H3P2 528 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 FBXO9Q9UK97 447 aaPredicted RBP10.78□□□□□ -0.68
SS18-225ENST00000585121 NAV3Q8IVL0 2385 aa10.78□□□□□ -0.68
SS18-225ENST00000585121 HEATR1Q9H583 2144 aaKnown RBP10.78□□□□□ -0.68
SS18-225ENST00000585121 HIVEP2P31629 2446 aa10.77□□□□□ -0.68
SS18-225ENST00000585121 TLN2Q9Y4G6 2542 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 A0A1W2PRG6 482 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 MCIDASD6RGH6 385 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 SEC14L2O76054 403 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 BCL10O95999 233 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 IGLV1-44P01699 117 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 TP53P04637 393 aaPredicted RBP10.77□□□□□ -0.69
SS18-225ENST00000585121 CD79AP11912 226 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 SERPINF1P36955 418 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 OR1E2P47887 323 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
SS18-225ENST00000585121 SELENOWP63302 87 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 LIPEQ05469 1076 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 ST3GAL3Q11203 375 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 PIN1Q13526 163 aaPredicted RBP10.77□□□□□ -0.69
SS18-225ENST00000585121 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 NHLRC1Q6VVB1 395 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 HDDC2Q7Z4H3 204 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 TSPYL5Q86VY4 417 aaPredicted RBP10.77□□□□□ -0.69
SS18-225ENST00000585121 LRRC17Q8N6Y2 441 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 SGTBQ96EQ0 304 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 FOXB1Q99853 325 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 PRSS27Q9BQR3 290 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 DENND2DQ9H6A0 471 aaPredicted RBP10.77□□□□□ -0.69
SS18-225ENST00000585121 CA10Q9NS85 328 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 CMTM6Q9NX76 183 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 TAS2R5Q9NYW4 299 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 GLTPQ9NZD2 209 aa10.77□□□□□ -0.69
SS18-225ENST00000585121 MED31Q9Y3C7 131 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms