RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SNTB2Q13425 540 aaKnown RBP12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 DAG1Q14118 895 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 DUSP7Q16829 419 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 GSG1Q2KHT4 349 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 FAM166AQ6J272 317 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 KRT80Q6KB66 452 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF813Q6ZN06 617 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 PXKQ7Z7A4 578 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF540Q8NDQ6 660 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 OR5J2Q8NH18 312 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 CKAP2Q8WWK9 683 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 CGREF1Q99674 301 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 ARHGDIGQ99819 225 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 BPESC1Q9GZL8 116 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 DYNLRB1Q9NP97 96 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 KCNS2Q9ULS6 477 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 TRIM33Q9UPN9 1127 aa12.93□□□□□ -0.34
RN7SL560P-201ENST00000577943 LOC100289279A0A1B0GTE1 492 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 HMGB1P1B2RPK0 211 aaPredicted RBP12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 CHP2O43745 196 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 OR6A2O95222 327 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 HLA-HP01893 362 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 C8BP07358 591 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 PIGFQ07326 219 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 NFYCQ13952 458 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 SELPLGQ14242 412 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 TTC33Q6PID6 262 aaPredicted RBP12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 DPP10Q8N608 796 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 GPR32P1Q8NGA4 272 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 OR6T1Q8NGN1 323 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 VANGL1Q8TAA9 524 aaPredicted RBP12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 SLC26A7Q8TE54 656 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 NEU4Q8WWR8 484 aaPredicted RBP12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 STON2Q8WXE9 905 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 TMEM158Q8WZ71 300 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 MAGEB18Q96M61 343 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 DOK1Q99704 481 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 FOXB1Q99853 325 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 REPIN1Q9BWE0 567 aaKnown RBP12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 NOX3Q9HBY0 568 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 B3GNT2Q9NY97 397 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 CMAHPQ9Y471 501 aa12.92□□□□□ -0.34
RN7SL560P-201ENST00000577943 IGHV4-61A0A0C4DH41 118 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 TMEM129A0AVI4 362 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 CH25HO95992 272 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 DAOP14920 347 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 B4GALT1P15291 398 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 PTDSS1P48651 473 aaKnown RBP12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 CSNK1A1P48729 337 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 BIDP55957 195 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 NHLRC1Q6VVB1 395 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 RETREG3Q86VR2 466 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 WDFY1Q8IWB7 410 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 SLC30A8Q8IWU4 369 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 ARIH2OSQ8N7S6 290 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 OR10A6Q8NH74 314 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 ADAMTS16Q8TE57 1224 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 TSPEARQ8WU66 669 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 MSI2Q96DH6 328 aaKnown RBP12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF385DQ9H6B1 395 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
RN7SL560P-201ENST00000577943 STAMBPO95630 424 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 RAB36O95755 333 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 IFNGR1P15260 489 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF23P17027 643 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 NR4A1P22736 598 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 IGFBP5P24593 272 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 RAB1AP62820 205 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 NPTX1Q15818 432 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 TRMT5Q32P41 509 aaKnown RBP12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 INTS11Q5TA45 600 aaKnown RBP12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 SLC35D2Q76EJ3 337 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 PATL1Q86TB9 770 aaKnown RBP12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 PHC2Q8IXK0 858 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 KAT8Q9H7Z6 458 aaKnown RBP12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 NANSQ9NR45 359 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 SLC7A7Q9UM01 511 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 SVEP1Q4LDE5 3571 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
RN7SL560P-201ENST00000577943 A0A0G2JND7 137 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 TRAPPC13A5PLN9 417 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 KPNA4O00629 521 aaPredicted RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 PHF1O43189 567 aaPredicted RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 RNF13O43567 381 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 EDF1O60869 148 aaKnown RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 UBL3O95164 117 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 TGFAP01135 160 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 HIST1H2ABP04908 130 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms