RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	MRPL39	Q9NYK5	338 aa	Known RBP	12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	TAS2R5	Q9NYW4	299 aa		12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	SELENON	Q9NZV5	590 aa		12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	ACTR3B	Q9P1U1	418 aa		12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	EGFL7	Q9UHF1	273 aa		12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	SH3GLB1	Q9Y371	365 aa		12.35	□□□□□ -0.43
EDC4-210	ENST00000575507	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	SLC35F4	A4IF30	521 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	TRAPPC13	A5PLN9	417 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507		M0R3G1	203 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	SLC43A1	O75387	559 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CH25H	O95992	272 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CELA3B	P08861	270 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	NQO1	P15559	274 aa	Known RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	MSX2	P35548	267 aa	Predicted RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	OR1E2	P47887	323 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	FABP6	P51161	128 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	IL1RL1	Q01638	556 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	POU3F1	Q03052	451 aa	Predicted RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CLEC12B	Q2HXU8	276 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	MTX3	Q5HYI7	312 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	HMBOX1	Q6NT76	420 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	DNM1P46	Q6ZS02	220 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CARM1	Q86X55	608 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	DHFR2	Q86XF0	187 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	NKAIN4	Q8IVV8	208 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	UEVLD	Q8IX04	471 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	C20orf196	Q8IYI0	205 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	C10orf53	Q8N6V4	93 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	SCAI	Q8N9R8	606 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	FAM162A	Q96A26	154 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CCDC124	Q96CT7	223 aa	Known RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	TRMT61A	Q96FX7	289 aa	Known RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	EPYC	Q99645	322 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	SLC7A8	Q9UHI5	535 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	POU2F3	Q9UKI9	436 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	CORIN	Q9Y5Q5	1042 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	ATP23	Q9Y6H3	246 aa		12.34	□□□□□ -0.43
EDC4-210	ENST00000575507	ROS1	P08922	2347 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	ERICH4	A6NGS2	130 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	OR6C65	A6NJZ3	312 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	C11orf98	E9PRG8	122 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	KPNA4	O00629	521 aa	Predicted RBP	12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	ARPC2	O15144	300 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	WNT11	O96014	354 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	HEXA	P06865	529 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	AHCY	P23526	432 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	CALCR	P30988	508 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	KRTAP1-1	Q07627	177 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	PUDP	Q08623	228 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	PIN1	Q13526	163 aa	Predicted RBP	12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	CAMK2D	Q13557	499 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	MFSD13A	Q14CX5	517 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	ZNF74	Q16587	644 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	LRRC23	Q53EV4	343 aa	Predicted RBP	12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	AGAP6	Q5VW22	663 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	LCN8	Q6JVE9	175 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	TTC33	Q6PID6	262 aa	Predicted RBP	12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	SLC46A3	Q7Z3Q1	461 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	MUC15	Q8N387	334 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	GPR137C	Q8N3F9	429 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	ANKK1	Q8NFD2	765 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	OR5J2	Q8NH18	312 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	LZIC	Q8WZA0	190 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	NSMCE2	Q96MF7	247 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	ASPN	Q9BXN1	380 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	CACNG6	Q9BXT2	260 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	TRIM15	Q9C019	465 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	CBLN4	Q9NTU7	201 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	CRNN	Q9UBG3	495 aa	Predicted RBP	12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	RPS6KA6	Q9UK32	745 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	BAG5	Q9UL15	447 aa		12.33	□□□□□ -0.44
EDC4-210	ENST00000575507	VPS13C	Q709C8	3753 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	RNF223	E7ERA6	249 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	SERPINI2	O75830	405 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	CIB2	O75838	187 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	MT-ATP6	P00846	226 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	IGLV1-44	P01699	117 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	CECR9	P0C854	216 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	ADORA3	P0DMS8	318 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	NCK1	P16333	377 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	UBE2N	P61088	152 aa	Known RBP	12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	LSM11	P83369	360 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	HGFAC	Q04756	655 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	CYBRD1	Q53TN4	286 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	C1QTNF12	Q5T7M4	302 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	KLHL24	Q6TFL4	600 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	CBLL1	Q75N03	491 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	PXK	Q7Z7A4	578 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	PIK3C3	Q8NEB9	887 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	PFN4	Q8NHR9	129 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	TMEM255B	Q8WV15	326 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	SLC38A2	Q96QD8	506 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	NOX3	Q9HBY0	568 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	OBP2B	Q9NPH6	170 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	DCAF13	Q9NV06	445 aa	Known RBP	12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	FAIM	Q9NVQ4	179 aa		12.32	□□□□□ -0.44
EDC4-210	ENST00000575507	SAMD4A	Q9UPU9	718 aa	Known RBP	12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms