RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 C11orf98E9PRG8 122 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 PLPP3O14495 311 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 LMX1BO60663 402 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 PIGFQ07326 219 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 RBBP4Q09028 425 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 SELPLGQ14242 412 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 FAM166AQ6J272 317 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 KRT80Q6KB66 452 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 WDFY1Q8IWB7 410 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 IL17RDQ8NFM7 739 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 LRR1Q96L50 414 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 ARHGDIGQ99819 225 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 FBXO9Q9UK97 447 aaPredicted RBP18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 KCNS2Q9ULS6 477 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 NDUFAF1Q9Y375 327 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 MALRD1Q5VYJ5 2156 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 FMO6PO60774 539 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 MT-ATP6P00846 226 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 ADORA3P0DMS8 318 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 B4GALT1P15291 398 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 PCBP3P57721 371 aaKnown RBP18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 NFYCQ13952 458 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 DUSP7Q16829 419 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 GSG1Q2KHT4 349 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF613Q6PF04 617 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 PXKQ7Z7A4 578 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 RETREG3Q86VR2 466 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 SNX32Q86XE0 403 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 ZCCHC24Q8N2G6 241 aaKnown RBP18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 ARIH2OSQ8N7S6 290 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 GPR32P1Q8NGA4 272 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 OR5J2Q8NH18 312 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 VANGL1Q8TAA9 524 aaPredicted RBP18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 TMEM158Q8WZ71 300 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 MS4A3Q96HJ5 214 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 BPESC1Q9GZL8 116 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 TRIM33Q9UPN9 1127 aa18.28■□□□□ 0.52
CHRNB1-206ENST00000574054 M0QX08 132 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 PHF1O43189 567 aaPredicted RBP18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 CHP2O43745 196 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 OR6A2O95222 327 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 DAOP14920 347 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 CSNK1A1P48729 337 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 BIDP55957 195 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 NPTX1Q15818 432 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 IL17RELQ6ZVW7 336 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 PHC2Q8IXK0 858 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 CDK20Q8IZL9 346 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 DPP10Q8N608 796 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF540Q8NDQ6 660 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 OR6T1Q8NGN1 323 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 CKAP2Q8WWK9 683 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 MSI2Q96DH6 328 aaKnown RBP18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 DOK1Q99704 481 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 NPHS2Q9NP85 383 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 B3GNT2Q9NY97 397 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 CMAHPQ9Y471 501 aa18.27■□□□□ 0.52
CHRNB1-206ENST00000574054 HMGB1P1B2RPK0 211 aaPredicted RBP18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 C8BP07358 591 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 ADRA2AP08913 450 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 IFNGR1P15260 489 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 IGFBP5P24593 272 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 PTDSS1P48651 473 aaKnown RBP18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 ENTPD8Q5MY95 495 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 NHLRC1Q6VVB1 395 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 WDR88Q6ZMY6 472 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 RBM45Q8IUH3 476 aaKnown RBP18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 SLC26A7Q8TE54 656 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 NEU4Q8WWR8 484 aaPredicted RBP18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 STON2Q8WXE9 905 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 MAGEB18Q96M61 343 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 FOXB1Q99853 325 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF385DQ9H6B1 395 aa18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHRNB1-206ENST00000574054 TMEM129A0AVI4 362 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 KPNA4O00629 521 aaPredicted RBP18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 STAMBPO95630 424 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 RAB36O95755 333 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 CH25HO95992 272 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF23P17027 643 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 NR4A1P22736 598 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 PCGF2P35227 344 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 TRMT5Q32P41 509 aaKnown RBP18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 TTC33Q6PID6 262 aaPredicted RBP18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 PATL1Q86TB9 770 aaKnown RBP18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 SLC30A8Q8IWU4 369 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 TPK1Q9H3S4 243 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 SLC7A7Q9UM01 511 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 SPEF1Q9Y4P9 236 aa18.25■□□□□ 0.51
CHRNB1-206ENST00000574054 A0A0G2JND7 137 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 RNF13O43567 381 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 TGFAP01135 160 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 SRD5A1P18405 259 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 GIPRP48546 466 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF74Q16587 644 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 GKAP1Q5VSY0 366 aaPredicted RBP18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 LINC00114Q6XXX2 140 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 SLC35D2Q76EJ3 337 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF627Q7L945 461 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 OR4D11Q8NGI4 311 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms