RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SWT1Q5T5J6 900 aaKnown RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 LRFN4Q6PJG9 635 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 CDK20Q8IZL9 346 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 BHLHE22Q8NFJ8 381 aaPredicted RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 OR10A6Q8NH74 314 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 MSI2Q96DH6 328 aaKnown RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 KCNK17Q96T54 332 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 EPYCQ99645 322 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 KCNS3Q9BQ31 491 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 PRSS27Q9BQR3 290 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 ZNF426Q9BUY5 554 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 ASPNQ9BXN1 380 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 RABEP2Q9H5N1 569 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 USP22Q9UPT9 525 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 NOX1Q9Y5S8 564 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 HMGB1P1B2RPK0 211 aaPredicted RBP15.63■□□□□ 0.09
CHD3-214ENST00000572579 hCG_2039718K7EN88 272 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 SERPINI2O75830 405 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 CH25HO95992 272 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 IFNGR1P15260 489 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 B4GALT1P15291 398 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 NR4A1P22736 598 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 AHCYP23526 432 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 PPOXP50336 477 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 NCALDP61601 193 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 CYP51A1Q16850 503 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 KRT80Q6KB66 452 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 RANBP3LQ86VV4 465 aaPredicted RBP15.63■□□□□ 0.09
CHD3-214ENST00000572579 PHC2Q8IXK0 858 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 C10orf53Q8N6V4 93 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 OR5J2Q8NH18 312 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 VANGL1Q8TAA9 524 aaPredicted RBP15.63■□□□□ 0.09
CHD3-214ENST00000572579 TMEM54Q969K7 222 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 BPESC1Q9GZL8 116 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 TMEM160Q9NX00 188 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 SELENONQ9NZV5 590 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 MALRD1Q5VYJ5 2156 aa15.63■□□□□ 0.09
CHD3-214ENST00000572579 LOC390937A0A1W2PQ73 354 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 SH3PXD2BA1X283 911 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 LRP5LA4QPB2 252 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 C11orf98E9PRG8 122 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 FXYD1O00168 92 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CHP2O43745 196 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 STAMBPO95630 424 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 FAM157CP0CG43 387 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CD79AP11912 226 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 H2AFXP16104 143 aaPredicted RBP15.62■□□□□ 0.09
CHD3-214ENST00000572579 NPR2P20594 1047 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 IGFBP5P24593 272 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 PCGF2P35227 344 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CAPZA2P47755 286 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 BIDP55957 195 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 NFYCQ13952 458 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CARTPTQ16568 116 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 NANOGP8Q6NSW7 305 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 ZNF813Q6ZN06 617 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 SPATA21Q7Z572 469 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CALHM3Q86XJ0 350 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 ZNF584Q8IVC4 421 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 SKA3Q8IX90 412 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 CCDC36Q8IYA8 594 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 ADAMTS16Q8TE57 1224 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 TSPEARQ8WU66 669 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 PCDHAC1Q9H158 963 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 NANOGQ9H9S0 305 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 MEPEQ9NQ76 525 aaPredicted RBP15.62■□□□□ 0.09
CHD3-214ENST00000572579 SLC13A4Q9UKG4 626 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 SLC7A7Q9UM01 511 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 FKBP7Q9Y680 259 aa15.62■□□□□ 0.09
CHD3-214ENST00000572579 LYNX1G3V0Z9 82 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 NDUFS8O00217 210 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 ANGPT2O15123 496 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 LMX1BO60663 402 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 MT-ATP6P00846 226 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 ADORA3P0DMS8 318 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 LYNX1P0DP58 116 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 TNFRSF1BP20333 461 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 FUT4P22083 530 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 IL2RGP31785 369 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 GIPRP48546 466 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 RUNX1T1Q06455 604 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 ZP4Q12836 540 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 SNTB2Q13425 540 aaKnown RBP15.61■□□□□ 0.09
CHD3-214ENST00000572579 DAG1Q14118 895 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 RABL3Q5HYI8 236 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 PODNL1Q6PEZ8 512 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 HDXQ7Z353 690 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 LRP11Q86VZ4 500 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 OR6X1Q8NH79 312 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 FOXB1Q99853 325 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 PIMREGQ9BSJ6 248 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 MRPL37Q9BZE1 423 aaKnown RBP15.61■□□□□ 0.09
CHD3-214ENST00000572579 ULBP2Q9BZM5 246 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 EVA1AQ9H8M9 152 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 MOV10Q9HCE1 1003 aaKnown RBP15.61■□□□□ 0.09
CHD3-214ENST00000572579 CDC42EP3Q9UKI2 254 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 POFUT2Q9Y2G5 429 aa15.61■□□□□ 0.09
CHD3-214ENST00000572579 A0A0G2JND7 137 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 ZNF726A6NNF4 738 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 RNF212BA8MTL3 300 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms