RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GSG1Q2KHT4 349 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 FAM166AQ6J272 317 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 VHLLQ6RSH7 139 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF813Q6ZN06 617 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 HDXQ7Z353 690 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 PIWIL3Q7Z3Z3 882 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 DPPA2Q7Z7J5 298 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 MDP1Q86V88 176 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 PTOV1Q86YD1 416 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 C10orf53Q8N6V4 93 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 OR6N1Q8NGY5 312 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 OR6X1Q8NH79 312 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 HPS1Q92902 700 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF837Q96EG3 531 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 SH3GL1Q99961 368 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 SHARPINQ9H0F6 387 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 KAT8Q9H7Z6 458 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 VIPAS39Q9H9C1 493 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 CMAHPQ9Y471 501 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 STAB1Q9NY15 2570 aa10.55□□□□□ -0.72
GTF3C1-204ENST00000564664 TMEM129A0AVI4 362 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 RNF212BA8MTL3 300 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 LY6HO94772 140 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 UBL3O95164 117 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 STAMBPO95630 424 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 NPPAP01160 153 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 HIST1H2ABP04908 130 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF35P13682 527 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 HLA-DOBP13765 273 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 APEHP13798 732 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF23P17027 643 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 CBLP22681 906 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 NPRL3Q12980 569 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 GGTLC2Q14390 218 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 TRMT5Q32P41 509 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 IQCCQ4KMZ1 466 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 TTMPQ5BVD1 217 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 PHYHD1Q5SRE7 291 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 REP15Q6BDI9 236 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 TTC33Q6PID6 262 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 HIST3H2AQ7L7L0 130 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 SPATA21Q7Z572 469 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF786Q8N393 782 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 HIST1H2ACQ93077 130 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 TXNDC15Q96J42 360 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 MOGAT1Q96PD6 335 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 EMC6Q9BV81 110 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 ULBP2Q9BZM5 246 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 PCDHAC1Q9H158 963 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF385DQ9H6B1 395 aa10.54□□□□□ -0.72
GTF3C1-204ENST00000564664 LOC100289279A0A1B0GTE1 492 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 TRAPPC13A5PLN9 417 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 HLA-HP01893 362 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CELA3BP08861 270 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ADORA3P0DMS8 318 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CD79AP11912 226 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 DAOP14920 347 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF14P17017 642 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 HNF1AP20823 631 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 GLRXP35754 106 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CSNK1A1P48729 337 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CHN2P52757 468 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 RAB1AP62820 205 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 NFYCQ13952 458 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CYLC2Q14093 348 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CARTPTQ16568 116 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF74Q16587 644 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ENTPD8Q5MY95 495 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CARD17Q5XLA6 110 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 CCDC80Q76M96 950 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 LSRQ86X29 649 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ANKS4BQ8N8V4 417 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 OR6T1Q8NGN1 323 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 SLC26A7Q8TE54 656 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ADAMTS16Q8TE57 1224 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 UBASH3BQ8TF42 649 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 MRPL24Q96A35 216 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 SLC25A44Q96H78 314 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF75AQ96N20 296 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 FOXB1Q99853 325 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 WFDC6Q9BQY6 131 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 POLR2J2Q9GZM3 115 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 POLR2J3Q9H1A7 115 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 SEC61A2Q9H9S3 476 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 NOX3Q9HBY0 568 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 NANSQ9NR45 359 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 MED29Q9NX70 200 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 GLTPQ9NZD2 209 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 ZNF229Q9UJW7 825 aa10.53□□□□□ -0.72
GTF3C1-204ENST00000564664 MALRD1Q5VYJ5 2156 aa10.52□□□□□ -0.72
GTF3C1-204ENST00000564664 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC22A23A1A5C7 686 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms