RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NOX1Q9Y5S8 564 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 PRRC2CQ9Y520 2896 aaKnown RBP11.51□□□□□ -0.57
SPG7-209ENST00000564047 IGHV3-15A0A0B4J1V0 119 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 A0A1W2PRG6 482 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CLCA1A8K7I4 914 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CYTIPO60759 359 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 RAMP1O60894 148 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 TXNDC12O95881 172 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 EDN3P14138 238 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CRHBPP24387 322 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CDC42P60953 191 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 C1DQ13901 141 aaKnown RBP11.51□□□□□ -0.57
SPG7-209ENST00000564047 SLC17A1Q14916 467 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 PON3Q15166 354 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 EMC4Q5J8M3 183 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 C6orf141Q5SZD1 244 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 GPR139Q6DWJ6 353 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 FCRLAQ7L513 359 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 FAM122BQ7Z309 247 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 ADGRE4PQ86SQ3 457 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 CCDC103Q8IW40 242 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 KDM8Q8N371 416 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 ROBO4Q8WZ75 1007 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 ERMAPQ96PL5 475 aaPredicted RBP11.51□□□□□ -0.57
SPG7-209ENST00000564047 SLC38A2Q96QD8 506 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 DOK1Q99704 481 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
SPG7-209ENST00000564047 TXNIPQ9H3M7 391 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
SPG7-209ENST00000564047 IER3IP1Q9Y5U9 82 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 FBN2P35556 2912 aa11.51□□□□□ -0.57
SPG7-209ENST00000564047 ZNF716A6NP11 495 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 SURF4O15260 269 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 FCGR2AP12318 317 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 HLA-DOBP13765 273 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 GABRA1P14867 456 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 ZNF43P17038 809 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 DCKP27707 260 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 NOS3P29474 1203 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 SDHAP31040 664 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 PTGER4P35408 488 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 DAP3P51398 398 aaKnown RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 SLC16A1P53985 500 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 CXCR4P61073 352 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 ISL1P61371 349 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 ERVK-25P63136 954 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 POU3F1Q03052 451 aaPredicted RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 ACKR1Q16570 336 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 GFRALQ6UXV0 394 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 KCTD8Q6ZWB6 473 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 GPAT4Q86UL3 456 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 CCDC71Q8IV32 467 aaPredicted RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 OR5M9Q8NGP3 310 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 FAM81AQ8TBF8 368 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 FAM57AQ8TBR7 257 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 RNF128Q8TEB7 428 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 TRUB1Q8WWH5 349 aaKnown RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 TMIGD2Q96BF3 282 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 TSPAN32Q96QS1 320 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 PRRG4Q9BZD6 226 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 CMC2Q9NRP2 79 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 IMPAD1Q9NX62 359 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 TVP23BQ9NYZ1 205 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 KLHL13Q9P2N7 655 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 CLCF1Q9UBD9 225 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 GRHPRQ9UBQ7 328 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 PLEKHB1Q9UF11 243 aaPredicted RBP11.5□□□□□ -0.57
SPG7-209ENST00000564047 ADAM18Q9Y3Q7 739 aa11.5□□□□□ -0.57
SPG7-209ENST00000564047 IGKV3D-15A0A087WSY6 115 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 TRIM64BA6NI03 449 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 SLC22A20A6NK97 555 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 ZNHIT1O43257 154 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 TRAF3IP2O43734 574 aaPredicted RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 MPZL2O60487 215 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 WDR1O75083 606 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 SERPINI2O75830 405 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 BCL10O95999 233 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 PLGP00747 810 aaPredicted RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 IFNGP01579 166 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 TPOP07202 933 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 IFNGR1P15260 489 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 ABOP16442 354 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 PCYT1AP49585 367 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 RPL27P61353 136 aaKnown RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 EFNB1P98172 346 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 RBPJQ06330 500 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 CD47Q08722 323 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 RASGEF1BQ0VAM2 473 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 RNPS1Q15287 305 aaKnown RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
SPG7-209ENST00000564047 ACSF3Q4G176 576 aaPredicted RBP11.49□□□□□ -0.57
SPG7-209ENST00000564047 ZNF362Q5T0B9 420 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms