RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SKA3Q8IX90 412 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 FAM58AQ8N1B3 248 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MS4A15Q8N5U1 240 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 FNDC5Q8NAU1 212 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ERMNQ8TAM6 284 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NDNFQ8TB73 568 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF564Q8TBZ8 553 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PYROXD1Q8WU10 500 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 DNASE2BQ8WZ79 361 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 RAB1CQ92928 201 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 CMTM7Q96FZ5 175 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 CHMP6Q96FZ7 201 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PAGE5Q96GU1 130 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PGLYRP4Q96LB8 373 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MS4A4EQ96PG1 132 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ATP5SQ99766 215 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ANKRD60Q9BZ19 345 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NDEL1Q9GZM8 345 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 OR52A5Q9H2C5 316 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 RNF167Q9H6Y7 350 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GNB4Q9HAV0 340 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 LYRM4Q9HD34 91 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MRPS30Q9NP92 439 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 LYARQ9NX58 379 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NKIRAS1Q9NYS0 192 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MTCH1Q9NZJ7 389 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 UXTQ9UBK9 157 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MOB4Q9Y3A3 225 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 FRMPD3Q5JV73 1810 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ERCC6L2Q5T890 1561 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 IGKV1D-8A0A087WSZ0 117 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 PDZK1P1A8MUH7 402 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 LOC110117498-PIK3R3F6TDL0 507 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 AIM2O14862 343 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 LINC01565O15544 149 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 MYO1DO94832 1006 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 DUSP14O95147 198 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 STSP08842 583 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 OR8U8P0C7N1 319 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 PGAM2P15259 253 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 IGLL1P15814 213 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 HMOX2P30519 316 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RFX3P48380 749 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 TMED10P49755 219 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 CCNG1P51959 295 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 PLK1P53350 603 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 DAOAP59103 153 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 DSTNP60981 165 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RAB11AP62491 216 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 TNNC1P63316 161 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 CXCL6P80162 114 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 MRPS22P82650 360 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SLAQ13239 276 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 DGCR6Q14129 220 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ARL6IP1Q15041 203 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RAB11BQ15907 218 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SOHLH1Q5JUK2 328 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 C22orf42Q6IC83 251 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SLC25A25Q6KCM7 469 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF343Q6P1L6 599 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ARCQ7LC44 396 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SLC26A11Q86WA9 606 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 CDKL3Q8IVW4 592 aaPredicted RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ST13P4Q8IZP2 240 aaPredicted RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 CDC26Q8NHZ8 85 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RHEBL1Q8TAI7 183 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF596Q8TC21 504 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 MARCH1Q8TCQ1 289 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 TNFRSF14Q92956 283 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 STMN2Q93045 179 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 CCDC126Q96EE4 140 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 HSFY1Q96LI6 401 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ALS2CR12Q96Q35 445 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 OR5M11Q96RB7 305 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 OR8B4Q96RC9 309 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ACBD6Q9BR61 282 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 FAIM2Q9BWQ8 316 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 TMEM59Q9BXS4 323 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SRXN1Q9BYN0 137 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SHCBP1LQ9BZQ2 653 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 API5Q9BZZ5 524 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ACTR6Q9GZN1 396 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 ROGDIQ9GZN7 287 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 IL22Q9GZX6 179 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RACGAP1Q9H0H5 632 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 NEUROG2Q9H2A3 272 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 OR51M1Q9H341 326 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 FBXO44Q9H4M3 255 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 FOLH1BQ9HBA9 442 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 MED4Q9NPJ6 270 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 PXMP2Q9NR77 195 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 TXLNGQ9NUQ3 528 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RSPH14Q9UHP6 348 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 LSM7Q9UK45 103 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 MMP17Q9ULZ9 603 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 UBQLN1Q9UMX0 589 aaKnown RBP2.43□□□□□ -2.02
TRAV28-201ENST00000557548 SLC22A14Q9Y267 594 aa2.43□□□□□ -2.02
TRAV28-201ENST00000557548 RHBDD3Q9Y3P4 386 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms