RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LRRN3E7EW58 273 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 SERPINI2O75830 405 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 THBS4P35443 961 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 HGFACQ04756 655 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 SELPLGQ14242 412 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 DUSP7Q16829 419 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 ENTPD8Q5MY95 495 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 ZNF813Q6ZN06 617 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 ZNF627Q7L945 461 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 PXKQ7Z7A4 578 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 PATL1Q86TB9 770 aaKnown RBP12.27□□□□□ -0.45
SNX6-210ENST00000557341 RETREG3Q86VR2 466 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 GPR32P1Q8NGA4 272 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 OR6N1Q8NGY5 312 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 OR5J2Q8NH18 312 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 TSPEARQ8WU66 669 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 NOX3Q9HBY0 568 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 NPHS2Q9NP85 383 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 DYNLRB1Q9NP97 96 aa12.27□□□□□ -0.45
SNX6-210ENST00000557341 C11orf98E9PRG8 122 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 PLPP3O14495 311 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 EDF1O60869 148 aaKnown RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 OR6A2O95222 327 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 HLA-HP01893 362 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 ADORA3P0DMS8 318 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 CD79AP11912 226 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 B4GALT1P15291 398 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 PCGF2P35227 344 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 CAMK2DQ13557 499 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 DAG1Q14118 895 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 NPTX1Q15818 432 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 INTS11Q5TA45 600 aaKnown RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 KRT80Q6KB66 452 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 LINC00114Q6XXX2 140 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 HDXQ7Z353 690 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 SVOPLQ8N434 492 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 ZNF540Q8NDQ6 660 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 VANGL1Q8TAA9 524 aaPredicted RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 SLC26A7Q8TE54 656 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 TXNDC15Q96J42 360 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 FOXB1Q99853 325 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 BEX2Q9BXY8 128 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 BPESC1Q9GZL8 116 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 KAT8Q9H7Z6 458 aaKnown RBP12.26□□□□□ -0.45
SNX6-210ENST00000557341 VIPAS39Q9H9C1 493 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 B3GNT2Q9NY97 397 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 KCNS2Q9ULS6 477 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 POFUT2Q9Y2G5 429 aa12.26□□□□□ -0.45
SNX6-210ENST00000557341 IGHV4-61A0A0C4DH41 118 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 A0A0G2JND7 137 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 M0QX08 132 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 LMX1BO60663 402 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 UBL3O95164 117 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 ZNF14P17017 642 aaPredicted RBP12.25□□□□□ -0.45
SNX6-210ENST00000557341 CSNK1A1P48729 337 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 BIDP55957 195 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 ZNF74Q16587 644 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 IQCCQ4KMZ1 466 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 FAM166AQ6J272 317 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 TTC33Q6PID6 262 aaPredicted RBP12.25□□□□□ -0.45
SNX6-210ENST00000557341 NHLRC1Q6VVB1 395 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 WDFY1Q8IWB7 410 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 OR10A6Q8NH74 314 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 NEU4Q8WWR8 484 aaPredicted RBP12.25□□□□□ -0.45
SNX6-210ENST00000557341 RASSF5Q8WWW0 418 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 SHARPINQ9H0F6 387 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 NANSQ9NR45 359 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
SNX6-210ENST00000557341 SLC7A7Q9UM01 511 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 CMAHPQ9Y471 501 aa12.25□□□□□ -0.45
SNX6-210ENST00000557341 TRAPPC13A5PLN9 417 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 KPNA4O00629 521 aaPredicted RBP12.24□□□□□ -0.45
SNX6-210ENST00000557341 RAB36O95755 333 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 DAOP14920 347 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 IFNGR1P15260 489 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 ZNF23P17027 643 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 CD247P20963 164 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 IGFBP5P24593 272 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 PTDSS1P48651 473 aaKnown RBP12.24□□□□□ -0.45
SNX6-210ENST00000557341 PIGFQ07326 219 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 TRMT5Q32P41 509 aaKnown RBP12.24□□□□□ -0.45
SNX6-210ENST00000557341 METTL21CQ5VZV1 264 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 CDK20Q8IZL9 346 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 OR4D11Q8NGI4 311 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 TAMM41Q96BW9 452 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 MPP4Q96JB8 637 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 DOK1Q99704 481 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
SNX6-210ENST00000557341 SLC19A3Q9BZV2 496 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 PCDHAC1Q9H158 963 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 DENND2DQ9H6A0 471 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms