RNA–Protein interactions for RNA: ENST00000556591.1

CFAP54-208, Transcript of cilia and flagella associated protein 54, human

TSL 5

Gene CFAP54, Length 802 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CFAP54-208	ENST00000556591	CD300LF	Q8TDQ1	290 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF641	Q96N77	438 aa	Predicted RBP	2.57	□□□□□ -2
CFAP54-208	ENST00000556591	TSGA13	Q96PP4	275 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	RTBDN	Q9BSG5	229 aa	Predicted RBP	2.57	□□□□□ -2
CFAP54-208	ENST00000556591	FAIM2	Q9BWQ8	316 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	UGT1A7	Q9HAW7	530 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	UGT1A10	Q9HAW8	530 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	UGT1A8	Q9HAW9	530 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	TM9SF3	Q9HD45	589 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	ADAP2	Q9NPF8	381 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	CDH9	Q9ULB4	789 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	PACSIN2	Q9UNF0	486 aa	Predicted RBP	2.57	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF835	Q9Y2P0	537 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	MSH6	P52701	1360 aa		2.57	□□□□□ -2
CFAP54-208	ENST00000556591	GMFG	O60234	142 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	BGLAP	P02818	100 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	MAGEA8	P43361	318 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	IRX3	P78415	501 aa	Predicted RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	SCRN3	Q0VDG4	424 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	LY6E	Q16553	131 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	EXOC3L2	Q2M3D2	409 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	LY6G6F	Q5SQ64	297 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	ATAD3B	Q5T9A4	648 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	ENPP6	Q6UWR7	440 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591		Q6ZPB1	254 aa	Predicted RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF721	Q8TF20	911 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	EXOSC8	Q96B26	276 aa	Known RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	SGK3	Q96BR1	496 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	C10orf35	Q96D05	121 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	MED8	Q96G25	268 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	RPRD1A	Q96P16	312 aa	Predicted RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	COPS8	Q99627	209 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	CTRC	Q99895	268 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	RIOK1	Q9BRS2	568 aa	Known RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	TMEM43	Q9BTV4	400 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	GABARAPL3	Q9BY60	117 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	PPA2	Q9H2U2	334 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	MRPL47	Q9HD33	250 aa	Known RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	ADAM28	Q9UKQ2	775 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	YTHDF2	Q9Y5A9	579 aa	Known RBP	2.56	□□□□□ -2
CFAP54-208	ENST00000556591	CARMIL3	Q8ND23	1372 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591	CEMIP	Q8WUJ3	1361 aa		2.56	□□□□□ -2
CFAP54-208	ENST00000556591		A0A1B0GVI7	797 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	CIB4	A0PJX0	185 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	NDC80	O14777	642 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	GAK	O14976	1311 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	RHOXF2B	P0C7M4	288 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	ZDHHC11B	P0C7U3	371 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	TCN1	P20061	433 aa	Predicted RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	OMG	P23515	440 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	GPR6	P46095	362 aa	Predicted RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	NCBP2	P52298	156 aa	Known RBP eCLIP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	RPS21	P63220	83 aa	Known RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	MN1	Q10571	1320 aa	Predicted RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	DGUOK	Q16854	277 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	TTLL9	Q3SXZ7	439 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	TRIM40	Q6P9F5	258 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	STEAP2	Q8NFT2	490 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	SDR42E1	Q8WUS8	393 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	GEMIN6	Q8WXD5	167 aa	Known RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	FRZB	Q92765	325 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF430	Q9H8G1	570 aa	Predicted RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	NOX3	Q9HBY0	568 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	EXD2	Q9NVH0	621 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF629	Q9UEG4	869 aa	Predicted RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	OPN4	Q9UHM6	478 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	ISY1	Q9ULR0	285 aa	Known RBP	2.55	□□□□□ -2
CFAP54-208	ENST00000556591	ATP6V0A2	Q9Y487	856 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	CABIN1	Q9Y6J0	2220 aa		2.55	□□□□□ -2
CFAP54-208	ENST00000556591	WDR62	O43379	1518 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	IGSF9B	Q9UPX0	1349 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591		H0YCG3	227 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	FCMR	O60667	390 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	UPK3A	O75631	287 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	OR7A10	O76100	309 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	RHOBTB1	O94844	696 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF286B	P0CG31	522 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	SMIM10L1	P0DMW3	83 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	PGAM1	P18669	254 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	RORA	P35398	523 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	GYG1	P46976	350 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	IFNAR2	P48551	515 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	SUB1	P53999	127 aa	Known RBP eCLIP	2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ABCA11P	Q4W5N1	156 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	C5orf47	Q569G3	176 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	VAX1	Q5SQQ9	334 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF679	Q8IYX0	411 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	PGAM4	Q8N0Y7	254 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF709	Q8N972	641 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	SMIM10	Q96HG1	83 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	SORT1	Q99523	831 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	NDFIP1	Q9BT67	221 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	MCCC2	Q9HCC0	563 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	OR12D3	Q9UGF7	316 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF222	Q9UK12	451 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	BLOC1S6	Q9UL45	172 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	NUP214	P35658	2090 aa	Predicted RBP	2.54	□□□□□ -2
CFAP54-208	ENST00000556591	DOCK9	Q9BZ29	2069 aa		2.54	□□□□□ -2
CFAP54-208	ENST00000556591	ZNF208	O43345	1280 aa		2.53	□□□□□ -2
CFAP54-208	ENST00000556591	MGRN1	O60291	552 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms