RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PIGFQ07326 219 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 DAG1Q14118 895 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 SELPLGQ14242 412 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF613Q6PF04 617 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF813Q6ZN06 617 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 WDFY1Q8IWB7 410 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ZCCHC24Q8N2G6 241 aaKnown RBP19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ARIH2OSQ8N7S6 290 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF540Q8NDQ6 660 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 CGREF1Q99674 301 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 ARHGDIGQ99819 225 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 NOX3Q9HBY0 568 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 TMEM129A0AVI4 362 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 ANGPT2O15123 496 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 MT-ATP6P00846 226 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 C8BP07358 591 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 ERCC1P07992 297 aaPredicted RBP19.54■□□□□ 0.72
ACTN1-220ENST00000556433 SNTB2Q13425 540 aaKnown RBP19.54■□□□□ 0.72
ACTN1-220ENST00000556433 GSG1Q2KHT4 349 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 KRT80Q6KB66 452 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 LINC00114Q6XXX2 140 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 RETREG3Q86VR2 466 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 SNX32Q86XE0 403 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 DPP10Q8N608 796 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 GPR32P1Q8NGA4 272 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 OR6T1Q8NGN1 323 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 OR5J2Q8NH18 312 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 CKAP2Q8WWK9 683 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 NEU4Q8WWR8 484 aaPredicted RBP19.54■□□□□ 0.72
ACTN1-220ENST00000556433 STON2Q8WXE9 905 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 TMEM158Q8WZ71 300 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 MSI2Q96DH6 328 aaKnown RBP19.54■□□□□ 0.72
ACTN1-220ENST00000556433 REPIN1Q9BWE0 567 aaKnown RBP19.54■□□□□ 0.72
ACTN1-220ENST00000556433 ULBP2Q9BZM5 246 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 KCNS2Q9ULS6 477 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 TRIM33Q9UPN9 1127 aa19.54■□□□□ 0.72
ACTN1-220ENST00000556433 CPSF4LA6NMK7 179 aaKnown RBP19.53■□□□□ 0.72
ACTN1-220ENST00000556433 C11orf98E9PRG8 122 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 OR6A2O95222 327 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 STAMBPO95630 424 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 ADORA3P0DMS8 318 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 DAOP14920 347 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 NR4A1P22736 598 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 NPTX1Q15818 432 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 ENTPD8Q5MY95 495 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 FAM166AQ6J272 317 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 PHC2Q8IXK0 858 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 MS4A3Q96HJ5 214 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 MAGEB18Q96M61 343 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 BPESC1Q9GZL8 116 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF385DQ9H6B1 395 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 CHODLQ9H9P2 273 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 DYNLRB1Q9NP97 96 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 CMAHPQ9Y471 501 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 MALRD1Q5VYJ5 2156 aa19.53■□□□□ 0.72
ACTN1-220ENST00000556433 PHF1O43189 567 aaPredicted RBP19.52■□□□□ 0.72
ACTN1-220ENST00000556433 CHP2O43745 196 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 B4GALT1P15291 398 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF23P17027 643 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 CSNK1A1P48729 337 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 BIDP55957 195 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 NFYCQ13952 458 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 TTC33Q6PID6 262 aaPredicted RBP19.52■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF627Q7L945 461 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 RBM45Q8IUH3 476 aaKnown RBP19.52■□□□□ 0.72
ACTN1-220ENST00000556433 CDK20Q8IZL9 346 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 VANGL1Q8TAA9 524 aaPredicted RBP19.52■□□□□ 0.72
ACTN1-220ENST00000556433 TSPEARQ8WU66 669 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 FOXB1Q99853 325 aa19.52■□□□□ 0.72
ACTN1-220ENST00000556433 HMGB1P1B2RPK0 211 aaPredicted RBP19.51■□□□□ 0.71
ACTN1-220ENST00000556433 CH25HO95992 272 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 ADRA2AP08913 450 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 IFNGR1P15260 489 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 IGFBP5P24593 272 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 PTDSS1P48651 473 aaKnown RBP19.51■□□□□ 0.71
ACTN1-220ENST00000556433 RAB1AP62820 205 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 TRMT5Q32P41 509 aaKnown RBP19.51■□□□□ 0.71
ACTN1-220ENST00000556433 WDR88Q6ZMY6 472 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 PATL1Q86TB9 770 aaKnown RBP19.51■□□□□ 0.71
ACTN1-220ENST00000556433 SLC30A8Q8IWU4 369 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 OR4D11Q8NGI4 311 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 SLC26A7Q8TE54 656 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF75AQ96N20 296 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 KAT8Q9H7Z6 458 aaKnown RBP19.51■□□□□ 0.71
ACTN1-220ENST00000556433 NPHS2Q9NP85 383 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 SPEF1Q9Y4P9 236 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 MXRA5Q9NR99 2828 aa19.51■□□□□ 0.71
ACTN1-220ENST00000556433 LYPD3O95274 346 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 TGFAP01135 160 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 THY1P04216 161 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF14P17017 642 aaPredicted RBP19.5■□□□□ 0.71
ACTN1-220ENST00000556433 GIFP27352 417 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 GIPRP48546 466 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF74Q16587 644 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 SLC35D2Q76EJ3 337 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 OR10A6Q8NH74 314 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 ADAMTS16Q8TE57 1224 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 UBASH3BQ8TF42 649 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 DENND2DQ9H6A0 471 aaPredicted RBP19.5■□□□□ 0.71
ACTN1-220ENST00000556433 TAS2R5Q9NYW4 299 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms