RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 Q96MT0 163 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 OXGR1Q96P68 337 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 DDOQ99489 341 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 NAA11Q9BSU3 229 aaPredicted RBP9.11□□□□□ -0.95
SRP54-208ENST00000555557 NDEL1Q9GZM8 345 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 PRORYQ9H606 182 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 ZNF696Q9H7X3 374 aa9.11□□□□□ -0.95
SRP54-208ENST00000555557 RPRD1BQ9NQG5 326 aaKnown RBP9.11□□□□□ -0.95
SRP54-208ENST00000555557 A0A1B0GTH9 108 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 TMEM8BA6NDV4 472 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 KDM4EB2RXH2 506 aaPredicted RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 CCDC159P0C7I6 412 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 SLC16A1P53985 500 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 BIDP55957 195 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 PON3Q15166 354 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 BCL2A1Q16548 175 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ZNF239Q16600 458 aaKnown RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 PDSS1Q5T2R2 415 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 EEF1A1P5Q5VTE0 462 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 MEDAGQ5VYS4 303 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 NXNL2Q5VZ03 156 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 AHSA2Q719I0 299 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 PM20D2Q8IYS1 436 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 CISD2Q8N5K1 135 aaKnown RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 SYT14Q8NB59 555 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ABHD3Q8WU67 409 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ZNF566Q969W8 418 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 CPNE4Q96A23 557 aaPredicted RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 PNPLA2Q96AD5 504 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ZHX1-C8orf76Q96EF9 292 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ZNF385AQ96PM9 386 aaKnown RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 YTHDF1Q9BYJ9 559 aaKnown RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 FANCFQ9NPI8 374 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 TIGARQ9NQ88 270 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 SCN3BQ9NY72 215 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 H2AFY2Q9P0M6 372 aaPredicted RBP9.1□□□□□ -0.95
SRP54-208ENST00000555557 ERVK-18Q9QC07 812 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 PSORS1C1Q9UIG5 152 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 KLHL21Q9UJP4 597 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 CAMK2AQ9UQM7 478 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 RASD1Q9Y272 281 aa9.1□□□□□ -0.95
SRP54-208ENST00000555557 SH3D21A4FU49 640 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SLC35F4A4IF30 521 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CLCA1A8K7I4 914 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 DCTN6O00399 190 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 XKRYO14609 159 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PRODHO43272 600 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TRAF3IP2O43734 574 aaPredicted RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 IGHMP01871 453 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 HTR1AP08908 422 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 ADRA2AP08913 450 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 DBTP11182 482 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 C21orf33P30042 268 aaPredicted RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 CDH11P55287 796 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 RPS3AP61247 264 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 RPS7P62081 194 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 SLC35A2P78381 396 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TEKQ02763 1124 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 ZNF91Q05481 1191 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 APOFQ13790 326 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SLC17A1Q14916 467 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 KCTD21Q4G0X4 260 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 EMC4Q5J8M3 183 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CARD17Q5XLA6 110 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 NIPAL3Q6P499 406 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 FCRLAQ7L513 359 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SHFQ7M4L6 423 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 OR5M9Q8NGP3 310 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 FNDC9Q8TBE3 224 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 ASB10Q8WXI3 467 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CCDC90BQ9GZT6 254 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SYT4Q9H2B2 425 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 RERGLQ9H628 205 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PLCXD1Q9NUJ7 323 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TPRKBQ9Y3C4 175 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 NOX1Q9Y5S8 564 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PKD1L2Q7Z442 2459 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 A0A1B0GVC2 190 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PRSS37A4D1T9 235 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TRIM64A6NGJ6 449 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 DNPH1O43598 174 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 AQP8O94778 261 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 STSP08842 583 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CPN1P15169 458 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 PYCR1P32322 319 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 NTF4P34130 210 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 DAP3P51398 398 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 CLDN17P56750 224 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CAMK2DQ13557 499 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 LYPD4Q6UWN0 246 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 CREB3L2Q70SY1 520 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 MEPCEQ7L2J0 689 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms