RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 DAG1Q14118 895 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 OR7A5Q15622 319 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 C6orf136Q5SQH8 315 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SAXO2Q658L1 398 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 OR4F3Q6IEY1 312 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 KRT80Q6KB66 452 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 NIPAL3Q6P499 406 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 TNFAIP8L2Q6P589 184 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SYT10Q6XYQ8 523 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 GPAT4Q86UL3 456 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 MDP1Q86V88 176 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 DDIASQ8IXT1 998 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CMIPQ8IY22 773 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 IFT81Q8WYA0 676 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 RAB8BQ92930 207 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 PPP3R2Q96LZ3 170 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF75AQ96N20 296 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SUCNR1Q9BXA5 334 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 EXD2Q9NVH0 621 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 TBK1Q9UHD2 729 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 DOCK11Q5JSL3 2073 aa6.21□□□□□ -1.41
ATXN3-219ENST00000553488 AGAP5A6NIR3 686 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FTCDNL1E5RQL4 147 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 RNASET2O00584 256 aaKnown RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 KRT33AO76009 404 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 VAMP5O95183 116 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 AGR2O95994 175 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 CHRM4P08173 479 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 G6PDP11413 515 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF35P13682 527 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ADRA2CP18825 462 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 CRHR1P34998 444 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ARR3P36575 388 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ALDH3B1P43353 468 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 SEC24CP53992 1094 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ARF1P84077 181 aaKnown RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FOXL1Q12952 345 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 MAD2L1BPQ15013 274 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 MIDNQ504T8 468 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FAM209AQ5JX71 171 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 IL23RQ5VWK5 629 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FAHD2BQ6P2I3 314 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 TRMT10CQ7L0Y3 403 aaKnown RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 LRP11Q86VZ4 500 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 CNPY4Q8N129 248 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 C17orf53Q8N3J3 647 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 RIBC1Q8N443 379 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 TEX29Q8N6K0 151 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FNDC5Q8NAU1 212 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 XAGE5Q8WWM1 108 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 RDH5Q92781 318 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 DVL3Q92997 716 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 NEURL3Q96EH8 262 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 FAHD2AQ96GK7 314 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 C1orf147Q96MC9 270 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-219ENST00000553488 TXLNGYQ9BZA5 131 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 SLC38A1Q9H2H9 487 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF665Q9H7R5 613 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 CRLF2Q9HC73 371 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 GPR35Q9HC97 309 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ADPRHL2Q9NX46 363 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 ASIC5Q9NY37 505 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 B3GNT2Q9NY97 397 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 B3GAT1Q9P2W7 334 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 PFDN2Q9UHV9 154 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 RCE1Q9Y256 329 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 CMAHPQ9Y471 501 aa6.21□□□□□ -1.42
ATXN3-219ENST00000553488 TRBV23-1A0A0A0MS06 115 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 A0A0G2JMP0 313 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 A0A0X1KG70 313 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 CFAP73A6NFT4 308 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 HMGN4O00479 90 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PLPP2O43688 288 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 SEC14L2O76054 403 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PNMTP11086 282 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF14P17017 642 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 TCN1P20061 433 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 GLRXP35754 106 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ACAA2P42765 397 aaKnown RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 CLDN8P56748 225 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 TMEM33P57088 247 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 HPCAP84074 193 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 MYBPC1Q00872 1141 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 BNIP2Q12982 314 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 MAPK11Q15759 364 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 SYPL1Q16563 259 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 CEACAM16Q2WEN9 425 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 MRPL2Q5T653 305 aaKnown RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ATAD3BQ5T9A4 648 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 C1orf140Q5VVS0 124 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PRAMEF8Q5VWM4 474 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PRAMEF7Q5VXH5 474 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ANKRD46Q86W74 232 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 TMEM123Q8N131 208 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ANKFN1Q8N957 763 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 CCDC63Q8NA47 563 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 IL17RDQ8NFM7 739 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms