RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CDK5R2Q13319 367 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 CRMP1Q14194 572 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ACSF3Q4G176 576 aaPredicted RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 GTF2IRD2BQ6EKJ0 949 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 LEG1Q6P5S2 330 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 GTF2IRD2Q86UP8 949 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ADAD1Q96M93 576 aaKnown RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 NMNAT3Q96T66 252 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 FLVCR1Q9Y5Y0 555 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ALPK2Q86TB3 2170 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 FIGNL2A6NMB9 653 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ARHGEF9O43307 516 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 WDR1O75083 606 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 TGM6O95932 706 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 GABRA1P14867 456 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 PAICSP22234 425 aaKnown RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 ACVR2AP27037 513 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 PTGER4P35408 488 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 CDKN2AP42771 156 aaKnown RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 CLDN17P56750 224 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 TEKQ02763 1124 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 NFATC3Q12968 1075 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ITGADQ13349 1161 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 SLC25A30Q5SVS4 291 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 P4HA3Q7Z4N8 544 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 CD163Q86VB7 1156 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 NPEPL1Q8NDH3 523 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 OR6X1Q8NH79 312 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 LRR1Q96L50 414 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ZNF385AQ96PM9 386 aaKnown RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 EMC6Q9BV81 110 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 HINT3Q9NQE9 182 aaKnown RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 EMC3Q9P0I2 261 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 ING1Q9UK53 422 aaPredicted RBP25.6■■□□□ 1.69
BRF1-213ENST00000548421 PRR23D1E9PI22 279 aaPredicted RBP25.59■■□□□ 1.69
BRF1-213ENST00000548421 GPR171O14626 319 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 AKAP8O43823 692 aaKnown RBP25.59■■□□□ 1.69
BRF1-213ENST00000548421 WBP4O75554 376 aaKnown RBP25.59■■□□□ 1.69
BRF1-213ENST00000548421 PRR23D2P0DMB1 279 aaPredicted RBP25.59■■□□□ 1.69
BRF1-213ENST00000548421 CXXC5Q7LFL8 322 aaKnown RBP25.59■■□□□ 1.69
BRF1-213ENST00000548421 CPOQ8IVL8 374 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 MCEMP1Q8IX19 187 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 ZIC4Q8N9L1 334 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 CYB561A3Q8NBI2 242 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 CPT1CQ8TCG5 803 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 Q96MT0 163 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 SNX18Q96RF0 628 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 RNF122Q9H9V4 155 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 CLN6Q9NWW5 311 aa25.59■■□□□ 1.69
BRF1-213ENST00000548421 ZGRF1Q86YA3 2104 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 SLC35F4A4IF30 521 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 FAM183AA6NL82 134 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 ZNF726A6NNF4 738 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 RBPJQ06330 500 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 OCLNQ16625 522 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 TMEM201Q5SNT2 666 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 MEDAGQ5VYS4 303 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 PLBD1Q6P4A8 553 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 DDOQ99489 341 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 CALHM2Q9HA72 323 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 BCO1Q9HAY6 547 aa25.58■■□□□ 1.69
BRF1-213ENST00000548421 IGSF10Q6WRI0 2623 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 PRSS37A4D1T9 235 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 ZNF724A8MTY0 619 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 ATXN7O15265 892 aaPredicted RBP25.57■■□□□ 1.68
BRF1-213ENST00000548421 RENP00797 406 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 RUNX1T1Q06455 604 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 ARHGAP21Q5T5U3 1957 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 MED12LQ86YW9 2145 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 WDFY1Q8IWB7 410 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 HDAC2Q92769 488 aaKnown RBP25.57■■□□□ 1.68
BRF1-213ENST00000548421 WNT2BQ93097 391 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 OTULINQ96BN8 352 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 SLC25A44Q96H78 314 aaPredicted RBP25.57■■□□□ 1.68
BRF1-213ENST00000548421 GP6Q9HCN6 339 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 DNAJC27Q9NZQ0 273 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 VSX1Q9NZR4 365 aaPredicted RBP25.57■■□□□ 1.68
BRF1-213ENST00000548421 RCE1Q9Y256 329 aa25.57■■□□□ 1.68
BRF1-213ENST00000548421 OR6C68A6NDL8 312 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 CD8B2A6NJW9 211 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 KDM4EB2RXH2 506 aaPredicted RBP25.56■■□□□ 1.68
BRF1-213ENST00000548421 H7C1C5 153 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 PRRG2O14669 202 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 TRMUO75648 421 aaKnown RBP25.56■■□□□ 1.68
BRF1-213ENST00000548421 IGHG1P01857 330 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 LCN6P62502 163 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 C6orf141Q5SZD1 244 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 NXNL2Q5VZ03 156 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 NSUN5P2Q63ZY6 315 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 LAIR2Q6ISS4 152 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 BCDIN3DQ7Z5W3 292 aaKnown RBP25.56■■□□□ 1.68
BRF1-213ENST00000548421 ZNF566Q969W8 418 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 TMEM45BQ96B21 275 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 ZNF775Q96BV0 537 aaPredicted RBP25.56■■□□□ 1.68
BRF1-213ENST00000548421 KCNK17Q96T54 332 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 ZNF835Q9Y2P0 537 aa25.56■■□□□ 1.68
BRF1-213ENST00000548421 SHANK1Q9Y566 2161 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 M0R3G1 203 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 AHCYL1O43865 530 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 ENTPD6O75354 484 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms