RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 HGFACQ04756 655 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SNTB2Q13425 540 aaKnown RBP11.37□□□□□ -0.59
RTN3-213ENST00000543552 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
RTN3-213ENST00000543552 MS4A18Q3C1V0 323 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SPATA21Q7Z572 469 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 ANKS4BQ8N8V4 417 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 OR5J2Q8NH18 312 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SLC26A7Q8TE54 656 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 MOGAT1Q96PD6 335 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 CGREF1Q99674 301 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 ARHGDIGQ99819 225 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 NOX3Q9HBY0 568 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 CMAHPQ9Y471 501 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 RTTNQ86VV8 2226 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 LOC100289279A0A1B0GTE1 492 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 M0R3H8 397 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 PLPP3O14495 311 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 SEC14L2O76054 403 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 UBL3O95164 117 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 HPRP00739 348 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 HLA-HP01893 362 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 ADORA3P0DMS8 318 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 DAOP14920 347 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 ZNF23P17027 643 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 SRD5A1P18405 259 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 THBS2P35442 1172 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 EVX1P49640 407 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 GALK2Q01415 458 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 CAMK2DQ13557 499 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 NFYCQ13952 458 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 TTC33Q6PID6 262 aaPredicted RBP11.36□□□□□ -0.59
RTN3-213ENST00000543552 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 PTOV1Q86YD1 416 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 SVOPLQ8N434 492 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 CKAP2Q8WWK9 683 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
RTN3-213ENST00000543552 MPP4Q96JB8 637 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 FOXN4Q96NZ1 517 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 EMC6Q9BV81 110 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 RSPO3Q9BXY4 272 aaPredicted RBP11.36□□□□□ -0.59
RTN3-213ENST00000543552 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 NANSQ9NR45 359 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 ARGLU1Q9NWB6 273 aaPredicted RBP11.36□□□□□ -0.59
RTN3-213ENST00000543552 MED29Q9NX70 200 aa11.36□□□□□ -0.59
RTN3-213ENST00000543552 TRAPPC13A5PLN9 417 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 SERPINI2O75830 405 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 HIST1H2ABP04908 130 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 B4GALT1P15291 398 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 NR4A1P22736 598 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 GIFP27352 417 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 PCGF2P35227 344 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 CHN2P52757 468 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 MTPNP58546 118 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 GKAP1Q5VSY0 366 aaPredicted RBP11.35□□□□□ -0.59
RTN3-213ENST00000543552 METTL21CQ5VZV1 264 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 KRT80Q6KB66 452 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 HIST3H2AQ7L7L0 130 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 HDXQ7Z353 690 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
RTN3-213ENST00000543552 HDDC2Q7Z4H3 204 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
RTN3-213ENST00000543552 OR6T1Q8NGN1 323 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 OR6X1Q8NH79 312 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 HIST1H2ACQ93077 130 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 DOK1Q99704 481 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 FOXB1Q99853 325 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 KAT8Q9H7Z6 458 aaKnown RBP11.35□□□□□ -0.59
RTN3-213ENST00000543552 VIPAS39Q9H9C1 493 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 B3GNT2Q9NY97 397 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 ZNF229Q9UJW7 825 aa11.35□□□□□ -0.59
RTN3-213ENST00000543552 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 ZNF503-AS2A6NEH8 195 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 CPSF4LA6NMK7 179 aaKnown RBP11.34□□□□□ -0.59
RTN3-213ENST00000543552 M0QX08 132 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 M0R233 179 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 PHF1O43189 567 aaPredicted RBP11.34□□□□□ -0.59
RTN3-213ENST00000543552 RNF13O43567 381 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 SYNGR3O43761 229 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 TPST2O60704 377 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 FARS2O95363 451 aaKnown RBP11.34□□□□□ -0.59
RTN3-213ENST00000543552 OPN1SWP03999 348 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 IFNGR1P15260 489 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 CD247P20963 164 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 PTDSS1P48651 473 aaKnown RBP11.34□□□□□ -0.59
RTN3-213ENST00000543552 BIDP55957 195 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
RTN3-213ENST00000543552 ZNF74Q16587 644 aa11.34□□□□□ -0.59
RTN3-213ENST00000543552 DUSP7Q16829 419 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms