RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C2P06681 752 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 MELTFP08582 738 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 OR8G3PP0DMU2 310 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 UROSP10746 265 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 DRD4P21917 467 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PTDSS1P48651 473 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 IDH2P48735 452 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 HTR6P50406 440 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 RPS23P62266 143 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 COL10A1Q03692 680 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ZNF763Q0D2J5 394 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ILF2Q12905 390 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 CEACAM7Q14002 265 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 FRG1Q14331 258 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 LASP1Q14847 261 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 LARS2Q15031 903 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 OR7A5Q15622 319 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 UAP1Q16222 522 aaPredicted RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 IMPG1Q17R60 797 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 GSG1Q2KHT4 349 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 CEACAM16Q2WEN9 425 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 NSUN5P1Q3KNT7 163 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 TTMPQ5BVD1 217 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 DCST2Q5T1A1 773 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PRAMEF8Q5VWM4 474 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PRAMEF7Q5VXH5 474 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 CD276Q5ZPR3 534 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 FAM71E1Q6IPT2 247 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 RGS7BPQ6MZT1 257 aaPredicted RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 BTNL3Q6UXE8 466 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 Q6YL49 198 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 Q6ZSV7 163 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 MEPCEQ7L2J0 689 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 OLIG3Q7RTU3 272 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 CENPLQ8N0S6 344 aaPredicted RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 KDM8Q8N371 416 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 KLHL36Q8N4N3 616 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 SYNPRQ8TBG9 265 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 TBC1D15Q8TC07 691 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 MAGEE2Q8TD90 523 aaPredicted RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PYROXD1Q8WU10 500 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 DYRK2Q92630 601 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 RAB24Q969Q5 203 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 TMEM45BQ96B21 275 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 FOXRED1Q96CU9 486 aaPredicted RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 GIMAP5Q96F15 307 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 EGLN2Q96KS0 407 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 MS4A4EQ96PG1 132 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ACPTQ9BZG2 426 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 IQCGQ9H095 443 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 NELFAQ9H3P2 528 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PIGUQ9H490 435 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 NANOGQ9H9S0 305 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 MOV10Q9HCE1 1003 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ZCCHC3Q9NUD5 404 aaKnown RBP4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ACER3Q9NUN7 267 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 ADPRHL2Q9NX46 363 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 GRHL1Q9NZI5 618 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 SH3BP4Q9P0V3 963 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 OR5V1Q9UGF6 321 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 TIMM22Q9Y584 194 aa4.01□□□□□ -1.77
LIMS1-214ENST00000542845 PPIAL4EA0A075B759 164 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 TMED7-TICAM2A0A0A6YYA0 188 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PPIAL4CA0A0B4J2A2 164 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 TMEM72A0PK05 275 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PPIAL4DF5H284 164 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 C3orf84H3BNL1 204 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 H3BUI4 141 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 ANKRD28O15084 1053 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 DNPH1O43598 174 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 TRAF3IP2O43734 574 aaPredicted RBP4□□□□□ -1.77
LIMS1-214ENST00000542845 XPNPEP2O43895 674 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 SUPT7LO94864 414 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 KLHL2O95198 593 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 RAB36O95755 333 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PLATP00750 562 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 IGHV4-59P01825 116 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PPIAL4FP0DN26 164 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 CCL2P13500 99 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 ZNF35P13682 527 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 HSD3B1P14060 373 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 IGLL1P15814 213 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 FUT4P22083 530 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 TYK2P29597 1187 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
LIMS1-214ENST00000542845 SLC6A9P48067 706 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 CLK1P49759 484 aaKnown RBP4□□□□□ -1.77
LIMS1-214ENST00000542845 ZNF81P51508 661 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 AQP5P55064 265 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 CLDN17P56750 224 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 KLF3P57682 345 aaPredicted RBP4□□□□□ -1.77
LIMS1-214ENST00000542845 ERVS71-1P61550 626 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 RAB1AP62820 205 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 H3F3AP84243 136 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PAX8Q06710 450 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 BST1Q10588 318 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 SKP2Q13309 424 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 TP53BP2Q13625 1128 aa4□□□□□ -1.77
LIMS1-214ENST00000542845 PDE7AQ13946 482 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms