RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SLC13A4Q9UKG4 626 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 CORO2BQ9UQ03 480 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 NOX1Q9Y5S8 564 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 LRRN3E7EW58 273 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 TPST2O60704 377 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SERPINB7O75635 380 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ADRA2AP08913 450 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 IFNGR1P15260 489 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 B4GALT1P15291 398 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 GPX2P18283 190 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 AQP5P55064 265 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 CDH12P55289 794 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 PIGFQ07326 219 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 CAMK2DQ13557 499 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 RIN1Q13671 783 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SQLEQ14534 574 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 MSMPQ1L6U9 139 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF627Q7L945 461 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 RANBP3LQ86VV4 465 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ARMC8Q8IUR7 673 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 WDFY1Q8IWB7 410 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 HIPK4Q8NE63 616 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 OR6N1Q8NGY5 312 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 HPS1Q92902 700 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF75AQ96N20 296 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 TMEM43Q9BTV4 400 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 CCDC28BQ9BUN5 200 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 MRPL37Q9BZE1 423 aaKnown RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ULBP2Q9BZM5 246 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 TPK1Q9H3S4 243 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF726A6NNF4 738 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 EVPLLA8MZ36 301 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 LYNX1G3V0Z9 82 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 PLPP3O14495 311 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SYNGR3O43761 229 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SERPINI2O75830 405 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 LYNX1P0DP58 116 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 TRIP10Q15642 601 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 AGKQ53H12 422 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SNX32Q86XE0 403 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 LRRC8CQ8TDW0 803 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 FOXB1Q99853 325 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-213ENST00000540725 EVA1AQ9H8M9 152 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF224Q9NZL3 707 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 ANGPT4Q9Y264 503 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
SNHG1-213ENST00000540725 M0R233 179 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 M0R3H8 397 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 ERLIN1O75477 346 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 MFN2O95140 757 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 RAB36O95755 333 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF35P13682 527 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 AHCYP23526 432 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 GIPRP48546 466 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 PTDSS1P48651 473 aaKnown RBP12.17□□□□□ -0.46
SNHG1-213ENST00000540725 CSNK1A1P48729 337 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 EVX1P49640 407 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 CDH15P55291 814 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 BEND6Q5SZJ8 279 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-213ENST00000540725 SMYD1Q8NB12 490 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 OR5J2Q8NH18 312 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 MCHR1Q99705 422 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 DENND2DQ9H6A0 471 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-213ENST00000540725 REV1Q9UBZ9 1251 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 TENM1Q9UKZ4 2725 aa12.17□□□□□ -0.46
SNHG1-213ENST00000540725 C11orf98E9PRG8 122 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 FMO6PO60774 539 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 MT-ATP6P00846 226 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 ADORA3P0DMS8 318 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 GLRXP35754 106 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 ATP4BP51164 291 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 BIDP55957 195 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 PCBP3P57721 371 aaKnown RBP12.16□□□□□ -0.46
SNHG1-213ENST00000540725 RPS23P62266 143 aaKnown RBP12.16□□□□□ -0.46
SNHG1-213ENST00000540725 RAB1AP62820 205 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 CCNIQ14094 377 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 GKAP1Q5VSY0 366 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-213ENST00000540725 LIPNQ5VXI9 398 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF613Q6PF04 617 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 DLEU7Q6UYE1 221 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 PTOV1Q86YD1 416 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 C11orf65Q8NCR3 313 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 ARHGDIGQ99819 225 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 SYT3Q9BQG1 590 aa12.16□□□□□ -0.46
SNHG1-213ENST00000540725 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-213ENST00000540725 CHP2O43745 196 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 UBL3O95164 117 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 OR6A2O95222 327 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 OPN1SWP03999 348 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms