RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ARF5P84085 180 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 SSBP1Q04837 148 aaKnown RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 HYAL1Q12794 435 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZNF155Q12901 538 aaPredicted RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 FOXD4Q12950 439 aaPredicted RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 OR2F1Q13607 317 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZNF345Q14585 488 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 SMCO1Q147U7 214 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 IRF4Q15306 451 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 GPR68Q15743 365 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZNF791Q3KP31 576 aaPredicted RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 EIPR1Q53HC9 387 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 EOGTQ5NDL2 527 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 LY6G5CQ5SRR4 150 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 HES5Q5TA89 166 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 SLC30A6Q6NXT4 461 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ARL9Q6T311 187 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ALKAL2Q6UX46 152 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZNF852Q6ZMS4 543 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 C17orf107Q6ZR85 190 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 FAM122BQ7Z309 247 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TRMT11Q7Z4G4 463 aaKnown RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 PXKQ7Z7A4 578 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TMPRSS11BQ86T26 416 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TMEM150AQ86TG1 271 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZFP41Q8N8Y5 198 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 MORN4Q8NDC4 146 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 BEST4Q8NFU0 473 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 VN1R2Q8NFZ6 395 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 GPR32P1Q8NGA4 272 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 OR1J4Q8NGS1 313 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 OR6S1Q8NH40 331 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 OR1S1Q8NH92 325 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 SFXN5Q8TD22 340 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TNFAIP8L1Q8WVP5 186 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ACOT11Q8WXI4 607 aaPredicted RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 FGF11Q92914 225 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 MYEOVQ96EZ4 313 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 WBP1Q96G27 269 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 LRFN5Q96NI6 719 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 PTDSS2Q9BVG9 487 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TEX101Q9BY14 249 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 FXYD6Q9H0Q3 95 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 OR10A4Q9H209 315 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ZNF768Q9H5H4 540 aaKnown RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 HEYLQ9NQ87 328 aaPredicted RBP6.01□□□□□ -1.45
USP28-202ENST00000535607 ZFP57Q9NU63 452 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 TRPC4Q9UBN4 977 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 CTSFQ9UBX1 484 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 FBXL2Q9UKC9 423 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 REV3LO60673 3130 aa6.01□□□□□ -1.45
USP28-202ENST00000535607 ANAPC1Q9H1A4 1944 aa6□□□□□ -1.45
USP28-202ENST00000535607 METTL21EPA6NDL7 271 aa6□□□□□ -1.45
USP28-202ENST00000535607 UNC119BA6NIH7 251 aa6□□□□□ -1.45
USP28-202ENST00000535607 RFPL4AA6NLU0 287 aa6□□□□□ -1.45
USP28-202ENST00000535607 RFPL4AL1F8VTS6 287 aa6□□□□□ -1.45
USP28-202ENST00000535607 NUPL2O15504 423 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 RBBP9O75884 186 aa6□□□□□ -1.45
USP28-202ENST00000535607 KLK1P06870 262 aa6□□□□□ -1.45
USP28-202ENST00000535607 FABP1P07148 127 aa6□□□□□ -1.45
USP28-202ENST00000535607 IGFBP1P08833 259 aaPredicted RBP6□□□□□ -1.45
USP28-202ENST00000535607 UCHL1P09936 223 aa6□□□□□ -1.45
USP28-202ENST00000535607 ZNF806P0C7X5 589 aa6□□□□□ -1.45
USP28-202ENST00000535607 DRD5P21918 477 aa6□□□□□ -1.45
USP28-202ENST00000535607 SHC1P29353 583 aa6□□□□□ -1.45
USP28-202ENST00000535607 HSD17B2P37059 387 aa6□□□□□ -1.45
USP28-202ENST00000535607 DGKEP52429 567 aa6□□□□□ -1.45
USP28-202ENST00000535607 RPS24P62847 133 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 EIF5AP63241 154 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 DGCR2P98153 550 aa6□□□□□ -1.45
USP28-202ENST00000535607 HMGN3Q15651 99 aa6□□□□□ -1.45
USP28-202ENST00000535607 LTB4RQ15722 352 aa6□□□□□ -1.45
USP28-202ENST00000535607 GUCA2BQ16661 112 aa6□□□□□ -1.45
USP28-202ENST00000535607 RNF212Q495C1 297 aa6□□□□□ -1.45
USP28-202ENST00000535607 ACSM3Q53FZ2 586 aa6□□□□□ -1.45
USP28-202ENST00000535607 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
USP28-202ENST00000535607 TMEM69Q5SWH9 247 aa6□□□□□ -1.45
USP28-202ENST00000535607 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
USP28-202ENST00000535607 FCRLBQ6BAA4 426 aa6□□□□□ -1.45
USP28-202ENST00000535607 SP5Q6BEB4 398 aaPredicted RBP6□□□□□ -1.45
USP28-202ENST00000535607 EIF5AL1Q6IS14 154 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 TNFAIP8L2Q6P589 184 aaPredicted RBP6□□□□□ -1.45
USP28-202ENST00000535607 CORO6Q6QEF8 472 aa6□□□□□ -1.45
USP28-202ENST00000535607 TSSK4Q6SA08 328 aa6□□□□□ -1.45
USP28-202ENST00000535607 APOOLQ6UXV4 268 aa6□□□□□ -1.45
USP28-202ENST00000535607 TMEM64Q6YI46 380 aa6□□□□□ -1.45
USP28-202ENST00000535607 ZNF704Q6ZNC4 412 aaPredicted RBP6□□□□□ -1.45
USP28-202ENST00000535607 MBOAT2Q6ZWT7 520 aa6□□□□□ -1.45
USP28-202ENST00000535607 BCDIN3DQ7Z5W3 292 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 STX12Q86Y82 276 aa6□□□□□ -1.45
USP28-202ENST00000535607 CFAP206Q8IYR0 622 aa6□□□□□ -1.45
USP28-202ENST00000535607 RNF113BQ8IZP6 322 aaKnown RBP6□□□□□ -1.45
USP28-202ENST00000535607 HDDC3Q8N4P3 179 aa6□□□□□ -1.45
USP28-202ENST00000535607 DNAAF1Q8NEP3 725 aa6□□□□□ -1.45
USP28-202ENST00000535607 OR10H4Q8NGA5 316 aa6□□□□□ -1.45
USP28-202ENST00000535607 OR4F15Q8NGB8 312 aa6□□□□□ -1.45
USP28-202ENST00000535607 OR11G2Q8NGC1 345 aa6□□□□□ -1.45
USP28-202ENST00000535607 OR51G2Q8NGK0 314 aa6□□□□□ -1.45
USP28-202ENST00000535607 OR5D16Q8NGK9 328 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms