RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 C6orf106Q9H6K1 298 aaPredicted RBP3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 ARMC7Q9H6L4 198 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 CAB39LQ9H9S4 337 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC38A10Q9HBR0 1119 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 ZFP57Q9NU63 452 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 GIN1Q9NXP7 522 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM181Q9P2C4 612 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC17A7Q9P2U7 560 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 SPRR3Q9UBC9 169 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 RCL1Q9Y2P8 373 aaKnown RBP3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 AUP1Q9Y679 476 aa3.53□□□□□ -1.84
AC055878.1-201ENST00000531858 TRGV8A0A0C4DH27 118 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 FAM231BA6NCW3 169 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 USP27XA6NNY8 438 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 FOXI3A8MTJ6 420 aaPredicted RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MPTX1A8MV57 137 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 F8VP50 259 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MKRN2OSH3BPM6 223 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 DCTN6O00399 190 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 TOR1AO14656 332 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MGRN1O60291 552 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 NDUFS6O75380 124 aaKnown RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 PLEKHA8P1O95397 391 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 HBE1P02100 147 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 FGGP02679 453 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 GLAP06280 429 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 KRT16P08779 473 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A6P0DMU7 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A5P0DMU8 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A10P0DMU9 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A7P0DMV0 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MGMTP16455 207 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 PRKACGP22612 351 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 HOXA6P31267 233 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ARR3P36575 388 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ALDH3B2P48448 385 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 TAS2R39P59534 338 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 RPS15AP62244 130 aaKnown RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 VSNL1P62760 191 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 FKBP3Q00688 224 aaKnown RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CCL14Q16627 93 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 C5orf64Q2M2E5 130 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 C14orf28Q4W4Y0 310 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A1Q5HYN5 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ZNF691Q5VV52 312 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 NADSYN1Q6IA69 706 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 C11orf71Q6IPW1 123 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ZNF425Q6IV72 752 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 C11orf87Q6NUJ2 197 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 LRRTM1Q86UE6 522 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 RFLNBQ8N5W9 214 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 OR6K2Q8NGY2 324 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 OR56B4Q8NH76 319 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 OR2T6Q8NHC8 308 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CT45A3Q8NHU0 189 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MRAPQ8TCY5 172 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ACER1Q8TDN7 264 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ADAMTS16Q8TE57 1224 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CDKL2Q92772 493 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 NEIL2Q969S2 332 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CNRIP1Q96F85 164 aaPredicted RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ZNF514Q96K75 400 aaPredicted RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MS4A4EQ96PG1 132 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 TBX15Q96SF7 602 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CTRCQ99895 268 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 ZNF251Q9BRH9 671 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 CLEC7AQ9BXN2 247 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 PORCNQ9H237 461 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 SIAEQ9HAT2 523 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 FOLH1BQ9HBA9 442 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 NECAP2Q9NVZ3 263 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MCUBQ9NWR8 336 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 PAK1IP1Q9NWT1 392 aaPredicted RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 SLC2A6Q9UGQ3 507 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 DCDC2Q9UHG0 476 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 PLLPQ9Y342 182 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 V9GYY9 64 aa3.52□□□□□ -1.85
AC055878.1-201ENST00000531858 UBN2Q6ZU65 1347 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 IGHV4-30-2A0A087WSY4 118 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 A0A1B0GW15 77 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 MEX3AA1L020 520 aaKnown RBP3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 F8VZ95 297 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 H3BN98 237 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 K7ENP7 123 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 SLC17A2O00624 439 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 ZNF749O43361 778 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 GATCO43716 136 aaKnown RBP3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 SCRG1O75711 98 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 GJB5O95377 273 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 CRYAAP02489 173 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 SERPINA5P05154 406 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 CMA1P23946 247 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 HTR1FP30939 366 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 EPHX2P34913 555 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 KIR2DS2P43631 304 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 HAAOP46952 286 aa3.51□□□□□ -1.85
AC055878.1-201ENST00000531858 CRISP1P54107 249 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms