RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF813Q6ZN06 617 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 SPATA21Q7Z572 469 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 PXKQ7Z7A4 578 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 WDFY1Q8IWB7 410 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 DPP10Q8N608 796 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ARIH2OSQ8N7S6 290 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 NEU4Q8WWR8 484 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-207ENST00000531727 MSI2Q96DH6 328 aaKnown RBP14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ARHGDIGQ99819 225 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ULBP2Q9BZM5 246 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 BPESC1Q9GZL8 116 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 KCNS2Q9ULS6 477 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 POFUT2Q9Y2G5 429 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 LOC100289279A0A1B0GTE1 492 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 PHF1O43189 567 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CHP2O43745 196 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 STAMBPO95630 424 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 MT-ATP6P00846 226 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 C8BP07358 591 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CD79AP11912 226 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF23P17027 643 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 IGFBP5P24593 272 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 MTPNP58546 118 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 SELPLGQ14242 412 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 NPTX1Q15818 432 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 DUSP7Q16829 419 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 KRT80Q6KB66 452 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 SNX32Q86XE0 403 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 GPR32P1Q8NGA4 272 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 OR6N1Q8NGY5 312 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 OR5J2Q8NH18 312 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CKAP2Q8WWK9 683 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF75AQ96N20 296 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CGREF1Q99674 301 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF385DQ9H6B1 395 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 INTS9Q9NV88 658 aaKnown RBP14.54□□□□□ -0.08
CPSF1-207ENST00000531727 NDUFAF1Q9Y375 327 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CMAHPQ9Y471 501 aa14.54□□□□□ -0.08
CPSF1-207ENST00000531727 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
CPSF1-207ENST00000531727 M0QX08 132 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 ANGPT2O15123 496 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 OPN1SWP03999 348 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 IGFBP1P08833 259 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-207ENST00000531727 DAOP14920 347 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 B4GALT1P15291 398 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF14P17017 642 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-207ENST00000531727 NR4A1P22736 598 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 AHCYP23526 432 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 GIFP27352 417 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 PIGFQ07326 219 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 ENTPD8Q5MY95 495 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 WDR88Q6ZMY6 472 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 RETREG3Q86VR2 466 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 SLC30A8Q8IWU4 369 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 CDK20Q8IZL9 346 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 ZCCHC24Q8N2G6 241 aaKnown RBP14.53□□□□□ -0.08
CPSF1-207ENST00000531727 OR6T1Q8NGN1 323 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 MS4A3Q96HJ5 214 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 DENND2DQ9H6A0 471 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-207ENST00000531727 CHODLQ9H9P2 273 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 DYNLRB1Q9NP97 96 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF224Q9NZL3 707 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 TRIM33Q9UPN9 1127 aa14.53□□□□□ -0.08
CPSF1-207ENST00000531727 SH3PXD2BA1X283 911 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 C11orf98E9PRG8 122 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 SERPINI2O75830 405 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 ADORA3P0DMS8 318 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 THBS2P35442 1172 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 CSNK1A1P48729 337 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 BIDP55957 195 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF74Q16587 644 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 FAM120AOSQ5T036 256 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 PATL1Q86TB9 770 aaKnown RBP14.52□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF786Q8N393 782 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 OR4D11Q8NGI4 311 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 TSPEARQ8WU66 669 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 THOC1Q96FV9 657 aaKnown RBP14.52□□□□□ -0.09
CPSF1-207ENST00000531727 MAGEB18Q96M61 343 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 FOXB1Q99853 325 aa14.52□□□□□ -0.09
CPSF1-207ENST00000531727 KAT8Q9H7Z6 458 aaKnown RBP14.52□□□□□ -0.09
CPSF1-207ENST00000531727 HMGB1P1B2RPK0 211 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-207ENST00000531727 UBL3O95164 117 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 OR6A2O95222 327 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 LYPD3O95274 346 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 RAB36O95755 333 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 TGFAP01135 160 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 THY1P04216 161 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 ADRA2AP08913 450 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 TACSTD2P09758 323 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF35P13682 527 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 IFNGR1P15260 489 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 SRD5A1P18405 259 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 HNF1AP20823 631 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 PCGF2P35227 344 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 PTDSS1P48651 473 aaKnown RBP14.51□□□□□ -0.09
CPSF1-207ENST00000531727 EVX1P49640 407 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 RAB1AP62820 205 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 ZP4Q12836 540 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 NFYCQ13952 458 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 TRMT5Q32P41 509 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms