RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNF74Q16587 644 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 GKAP1Q5VSY0 366 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-210ENST00000528441 CLEC2AQ6UVW9 174 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 PRSS57Q6UWY2 283 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 SLC35D2Q76EJ3 337 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 SLC46A3Q7Z3Q1 461 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 CYP4Z1Q86W10 505 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 WDR31Q8NA23 367 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 ADPRHL1Q8NDY3 354 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 OR4D11Q8NGI4 311 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 OR6S1Q8NH40 331 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 TMEM239Q8WW34 195 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 HTRA1Q92743 480 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF566Q969W8 418 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 OR2M2Q96R28 347 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 SMR3AQ99954 134 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 VRK1Q99986 396 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-210ENST00000528441 HOPXQ9BPY8 73 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-210ENST00000528441 RHNO1Q9BSD3 238 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 TRAF4Q9BUZ4 470 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-210ENST00000528441 FNDC11Q9BVV2 318 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 NDEL1Q9GZM8 345 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 KCNN2Q9H2S1 579 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 DYNLRB1Q9NP97 96 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 FAM32AQ9Y421 112 aaKnown RBP7.94□□□□□ -1.14
CMTM1-210ENST00000528441 FKBP7Q9Y680 259 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 V9GYQ6 96 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 ROS1P08922 2347 aa7.94□□□□□ -1.14
CMTM1-210ENST00000528441 RAI1Q7Z5J4 1906 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 TACC2O95359 2948 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 USF3Q68DE3 2245 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 IGHV1-18A0A0C4DH31 117 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 GMNCA6NCL1 334 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF99A8MXY4 864 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 MS4A18H0YCH9 400 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 PDLIM1O00151 329 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 FXYD1O00168 92 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 CXCR6O00574 342 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 PLPP3O14495 311 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 TRAF3IP2O43734 574 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 OR5F1O95221 314 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 HPRP00739 348 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 IGHG1P01857 330 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 F13BP05160 661 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 IFI30P13284 250 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 FUT1P19526 365 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 APOBEC3AP31941 199 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ACVR1BP36896 505 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF84P51523 738 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 SEC24CP53992 1094 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 GYS2P54840 703 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 LTBQ06643 244 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 CD47Q08722 323 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 PIN1Q13526 163 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 KRT72Q14CN4 511 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 TAF11Q15544 211 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 PGGHGQ32M88 737 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 MS4A18Q3C1V0 323 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 IFI44LQ53G44 452 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF544Q6NX49 715 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 B3GLCTQ6Y288 498 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF730Q6ZMV8 503 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 CCDC80Q76M96 950 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 HDDC2Q7Z4H3 204 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 PXKQ7Z7A4 578 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 CDK20Q8IZL9 346 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 MAPK1IP1LQ8NDC0 245 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ICA1LQ8NDH6 482 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 LILRB1Q8NHL6 650 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 TMEM255BQ8WV15 326 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 GEMIN6Q8WXD5 167 aaKnown RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 TXNDC15Q96J42 360 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF583Q96ND8 569 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 FOXB1Q99853 325 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 SLC19A3Q9BZV2 496 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 AMBRA1Q9C0C7 1298 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 POLR2J2Q9GZM3 115 aaKnown RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 POLR2J3Q9H1A7 115 aaKnown RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 B3GAT1Q9P2W7 334 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 RHCGQ9UBD6 479 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 RIMS3Q9UJD0 308 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 ZNF229Q9UJW7 825 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 GDF2Q9UK05 429 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-210ENST00000528441 SPEF1Q9Y4P9 236 aa7.93□□□□□ -1.14
CMTM1-210ENST00000528441 OTOGQ6ZRI0 2925 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 SH3PXD2BA1X283 911 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 OR7A10O76100 309 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 UBL3O95164 117 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 FAM107AO95990 144 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 SERPINA1P01009 418 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 HLA-HP01893 362 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 MT-ND1P03886 318 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 CECR9P0C854 216 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 DANCRP0C864 163 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 NCK1P16333 377 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 TCN1P20061 433 aaPredicted RBP7.92□□□□□ -1.14
CMTM1-210ENST00000528441 ARR3P36575 388 aa7.92□□□□□ -1.14
CMTM1-210ENST00000528441 GUCA1AP43080 201 aaPredicted RBP7.92□□□□□ -1.14
CMTM1-210ENST00000528441 DAP3P51398 398 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms