RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	SLC7A13	Q8TCU3	470 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CXorf40A	Q8TE69	158 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EBF4	Q9BQW3	602 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TMEM246	Q9BRR3	403 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	HES7	Q9BYE0	225 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TDRD3	Q9H7E2	651 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C8orf33	Q9H7E9	229 aa	Predicted RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF702P	Q9H963	129 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TMEM165	Q9HC07	324 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IL26	Q9NPH9	171 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PXMP2	Q9NR77	195 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TUBG2	Q9NRH3	451 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MTCH1	Q9NZJ7	389 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CD274	Q9NZQ7	290 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KCNE1B	A0A087WTH5	132 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ERICH4	A6NGS2	130 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	AGPAT2	O15120	278 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SPOP	O43791	374 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IGHV3-23	P01764	117 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	THY1	P04216	161 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CPN2	P22792	545 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	NUP62	P37198	522 aa	Predicted RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	VDAC2	P45880	294 aa	Predicted RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RGR	P47804	291 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SSR4	P51571	173 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	DAOA	P59103	153 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EGFEM1P	Q0D2K5	195 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C15orf32	Q32M92	178 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C1orf100	Q5SVJ3	147 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR52W1	Q6IF63	320 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TTC23L	Q6PF05	361 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PAMR1	Q6UXH9	720 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CDC20B	Q86Y33	519 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF100	Q8IYN0	542 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CMTM1	Q8IZ96	169 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF525	Q8N782	197 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TTC29	Q8NA56	475 aa	Predicted RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MAPK1IP1L	Q8NDC0	245 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BBS1	Q8NFJ9	593 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR2AP1	Q8NGE2	309 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CAPSL	Q8WWF8	208 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ACOT11	Q8WXI4	607 aa	Predicted RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	FGF14	Q92915	247 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF707	Q96C28	371 aa	Predicted RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	XPO6	Q96QU8	1125 aa	Known RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ATOH8	Q96SQ7	321 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TSG101	Q99816	390 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RARRES2	Q99969	163 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	POLR2J2	Q9GZM3	115 aa	Known RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IL22	Q9GZX6	179 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	POLR2J3	Q9H1A7	115 aa	Known RBP	3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	NEUROG2	Q9H2A3	272 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CWH43	Q9H720	699 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZDHHC11	Q9H8X9	412 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EXD2	Q9NVH0	621 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	QPCTL	Q9NXS2	382 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ABCD2	Q9UBJ2	740 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ASF1A	Q9Y294	204 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RHBDD3	Q9Y3P4	386 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CNTNAP1	P78357	1384 aa		3.74	□□□□□ -1.81
CALCOCO2-222	ENST00000514006		M0R3G1	203 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	AIRE	O43918	545 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF780A	O75290	641 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CCNB2	O95067	398 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	UBC	P0CG48	685 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SRM	P19623	302 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SLC1A2	P43004	574 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	NPBWR2	P48146	333 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MEOX2	P50222	304 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	UGT2B15	P54855	530 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF45	Q02386	682 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ACVR1	Q04771	509 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF763	Q0D2J5	394 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ECH1	Q13011	328 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	NKAIN1	Q4KMZ8	207 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	GPR157	Q5UAW9	335 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	AADACL4	Q5VUY2	407 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ANKRD26P1	Q6NSI1	321 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BHLHA9	Q7RTU4	235 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	LINC00523	Q86TU6	105 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR5B3	Q8NH48	314 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR9G1	Q8NH87	305 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	LYPD6B	Q8NI32	183 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TYMSOS	Q8TAI1	123 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	DTX3L	Q8TDB6	740 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ARHGDIG	Q99819	225 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RIOK2	Q9BVS4	552 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	DEFB126	Q9BYW3	111 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	UBXN6	Q9BZV1	441 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EHD1	Q9H4M9	534 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PLGRKT	Q9HBL7	147 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	AIG1	Q9NVV5	245 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MARCH5	Q9NX47	278 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CALY	Q9NYX4	217 aa		3.73	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KIF27	Q86VH2	1401 aa		3.72	□□□□□ -1.81
CALCOCO2-222	ENST00000514006		A0A1W2PQ72	361 aa		3.72	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	GABRR3	A8MPY1	467 aa		3.72	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C12orf77	C9JDV5	145 aa		3.72	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF701	M0R085	212 aa	Predicted RBP	3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms