RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OOSP2Q86WS3 158 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GVQW1Q8N7I0 195 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 OR4A16Q8NH70 328 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GOLGA5Q8TBA6 731 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 DQX1Q8TE96 717 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 PCNPQ8WW12 178 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GLYATL1Q969I3 302 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SLCO4A1Q96BD0 722 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 C8orf44Q96CB5 159 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GSDMAQ96QA5 445 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 RAB40CQ96S21 281 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 NPAS2Q99743 824 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SPAG8Q99932 426 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 CBWD1Q9BRT8 395 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 RBM24Q9BX46 236 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SUCNR1Q9BXA5 334 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 OCR1Q9BZK8 76 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 WWP1Q9H0M0 922 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ABCG8Q9H221 673 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GANQ9H2C0 597 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 HEXA-AS1Q9H8Q6 139 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 MOB1AQ9H8S9 216 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 DEPPQ9NTK1 212 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ACOXLQ9NUZ1 547 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 PDP1Q9P0J1 537 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 TRMT6Q9UJA5 497 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 VANGL2Q9ULK5 521 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 KLF13Q9Y2Y9 288 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 TEX264Q9Y6I9 313 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 HERC1Q15751 4861 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 IGHV1-45A0A0A0MS14 117 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 A0A1B0GX78 115 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 A0A1W2PQ72 361 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SYCE3A1L190 88 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SH3PXD2BA1X283 911 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ACOD1A6NK06 481 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 A8MUI8 341 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 KLRC4O43908 158 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SSX5O60225 188 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF354AO60765 605 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 HSF2BPO75031 334 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 IGHG1P01857 330 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 HEXBP07686 556 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ABHD2P08910 425 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 GATA2P23769 480 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 OR1E1P30953 314 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 CCR1P32246 355 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 OPRM1P35372 400 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 RFC3P40938 356 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 GPR1P46091 355 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ASMTP46597 345 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 KPNA2P52292 529 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 RIDAP52758 137 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 YBEYP58557 167 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 RPL27P61353 136 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 UBA52P62987 128 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 HERV-K104P63124 156 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ORC2Q13416 577 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 GAMTQ14353 236 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 PIGHQ14442 188 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC17A1Q14916 467 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SIX1Q15475 284 aaPredicted RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ECSCRQ19T08 205 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ANKDD1AQ495B1 522 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 TCTEX1D4Q5JR98 221 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF841Q6ZN19 808 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 BATF2Q8N1L9 274 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 OR6M1Q8NGM8 313 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 OR1B1Q8NGR6 318 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 FBXO30Q8TB52 745 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC13A3Q8WWT9 602 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 MRPL53Q96EL3 112 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 DTD2Q96FN9 168 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 RCHY1Q96PM5 261 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 ACCSQ96QU6 501 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 MED18Q9BUE0 208 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 TRIM62Q9BVG3 475 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 DCLRE1BQ9H816 532 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 JPT2Q9H910 190 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 POLE3Q9NRF9 147 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 PIGVQ9NUD9 493 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 HRASLS2Q9NWW9 162 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 CTSFQ9UBX1 484 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 TBK1Q9UHD2 729 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 MFHAS1Q9Y4C4 1052 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 MYH11P35749 1972 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 MPDZO75970 2070 aa2.77□□□□□ -1.97
TOPBP1-208ENST00000511439 LOC390937A0A1W2PQ73 354 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 OR52A4PA6NMU1 304 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 TMCO5BA8MYB1 307 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 CHEK1O14757 476 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 PLXNB1O43157 2135 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 SFTPBP07988 381 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 CSF3P09919 207 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 TPBGLP0DKB5 382 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 AREGP15514 252 aa2.76□□□□□ -1.97
TOPBP1-208ENST00000511439 RPS2P15880 293 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms