RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KLF3P57682 345 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-236ENST00000498808 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 ANXA8L1Q5VT79 327 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PEX5LQ8IYB4 626 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 CLIP4Q8N3C7 705 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PAQR4Q8N4S7 273 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-236ENST00000498808 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 SNX33Q8WV41 574 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 RAB1CQ92928 201 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 TMIGD2Q96BF3 282 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 TIMD4Q96H15 378 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 EMC6Q9BV81 110 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 TXLNGYQ9BZA5 131 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 POFUT2Q9Y2G5 429 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 MMP24Q9Y5R2 645 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 LOC102725191A0A1B0GVB3 256 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 AIM2O14862 343 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-236ENST00000498808 UBL3O95164 117 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 HPRP00739 348 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 FAM153BP0C7A2 387 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 NCF2P19878 526 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-236ENST00000498808 MAKP20794 623 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 GRPRP30550 384 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 LSP1P33241 339 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 HFEQ30201 348 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 LIN52Q52LA3 116 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 SPANXN4Q5MJ08 99 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 COX20Q5RI15 118 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 VPS37AQ8NEZ2 397 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 SYNPRQ8TBG9 265 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 TAAR8Q969N4 342 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 TESCQ96BS2 214 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 LRR1Q96L50 414 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 FOXB1Q99853 325 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 MMP27Q9H306 513 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 OR51B6Q9H340 312 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 SAP30LQ9HAJ7 183 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 UBAP1Q9NZ09 502 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 GPR160Q9UJ42 338 aa13.23□□□□□ -0.29
HDAC6-236ENST00000498808 PURGQ9UJV8 347 aaKnown RBP13.23□□□□□ -0.29
HDAC6-236ENST00000498808 NBEAL2Q6ZNJ1 2754 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 TPD52L2O43399 206 aaKnown RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 FOXH1O75593 365 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SHBGP04278 402 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SERPINA5P05154 406 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SELENOVP59797 346 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 TSTQ16762 297 aaKnown RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 FAM69AQ5T7M9 428 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 RHOUQ7L0Q8 258 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 PNPT1Q8TCS8 783 aaKnown RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 CCDC115Q96NT0 180 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 DECR2Q9NUI1 292 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SLCO1C1Q9NYB5 712 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF443Q9Y2A4 671 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SOX21Q9Y651 276 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
HDAC6-236ENST00000498808 KMT2CQ8NEZ4 4911 aaKnown RBP13.22□□□□□ -0.29
HDAC6-236ENST00000498808 SLC22A23A1A5C7 686 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 ISPDA4D126 451 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 SMIM23A6NLE4 172 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 MS4A18H0YCH9 400 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 TRAPPC2LH3BP13 241 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CCL2P13500 99 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CBLP22681 906 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 PCGF2P35227 344 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 GLO1Q04760 184 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF154Q13106 437 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CAMK2DQ13557 499 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 SMU1Q2TAY7 513 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 MS4A18Q3C1V0 323 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 NHLRC1Q6VVB1 395 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-236ENST00000498808 UEVLDQ8IX04 471 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 SKA3Q8IX90 412 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CCL17Q92583 94 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-236ENST00000498808 ELMOD3Q96FG2 381 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 CITED1Q99966 193 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 B3GAT2Q9NPZ5 323 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 TANC2Q9HCD6 1990 aa13.21□□□□□ -0.29
HDAC6-236ENST00000498808 IGKV1D-42A0A075B6H8 117 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 CCDC154A6NI56 674 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 OR2T1O43869 369 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 UBOX5O94941 541 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms