RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FZD7O75084 574 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 LYPD3O95274 346 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 IGKV3-15P01624 115 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 IGLV1-44P01699 117 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 C8BP07358 591 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 PATE4P0C8F1 98 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 UMPSP11172 480 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 IFNGR1P15260 489 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 TNFRSF1BP20333 461 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 CD247P20963 164 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 PAX7P23759 505 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ARR3P36575 388 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 SNRPD2P62316 118 aaKnown RBP8.32□□□□□ -1.08
MSH5-218ENST00000494646 PUDPQ08623 228 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 KLF10Q13118 480 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ADIPOQQ15848 244 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 VMACQ2NL98 169 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 TMEM249Q2WGJ8 235 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 RABL3Q5HYI8 236 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 C1QTNF12Q5T7M4 302 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 METTL21CQ5VZV1 264 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 KRT80Q6KB66 452 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ZNF613Q6PF04 617 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ZNF813Q6ZN06 617 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 SLC46A3Q7Z3Q1 461 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 PXKQ7Z7A4 578 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 PATL1Q86TB9 770 aaKnown RBP8.32□□□□□ -1.08
MSH5-218ENST00000494646 SCAIQ8N9R8 606 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ADPRHL1Q8NDY3 354 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ANKK1Q8NFD2 765 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 OR4F15Q8NGB8 312 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 OR6S1Q8NH40 331 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 STON2Q8WXE9 905 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 LRRC58Q96CX6 371 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 LRR1Q96L50 414 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 ECSITQ9BQ95 431 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 EVA1AQ9H8M9 152 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 B3GNT2Q9NY97 397 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 TAS2R5Q9NYW4 299 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 SH3GLB1Q9Y371 365 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 NOX1Q9Y5S8 564 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 MXRA5Q9NR99 2828 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 A0A096LNT2 108 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 IGHV2OR16-5A0A0B4J2B6 119 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 TMEM129A0AVI4 362 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 TRAPPC13A5PLN9 417 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 A8MV72 311 aaPredicted RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 VSTM5A8MXK1 200 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 BLOC1S5-TXNDC5H3BN57 136 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 HAX1O00165 279 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 RNF13O43567 381 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 TLX2O43763 284 aaPredicted RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 FMO6PO60774 539 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 HIST1H2ABP04908 130 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 VIMP08670 466 aaKnown RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 B4GALT1P15291 398 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SLC25A16P16260 332 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 NPR2P20594 1047 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 PCGF2P35227 344 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 PTDSS1P48651 473 aaKnown RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 CSNK1A1P48729 337 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 PDLIM4P50479 330 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 CRYBA2P53672 197 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 RAB1AP62820 205 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSH5-218ENST00000494646 LOXL1Q08397 574 aaPredicted RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 DAG1Q14118 895 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 MELKQ14680 651 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 ZNF74Q16587 644 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 TRMT5Q32P41 509 aaKnown RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 INTS11Q5TA45 600 aaKnown RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 REP15Q6BDI9 236 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 CGB2Q6NT52 195 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SLC35D2Q76EJ3 337 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 CCDC80Q76M96 950 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 HIST3H2AQ7L7L0 130 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SPATA21Q7Z572 469 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 HIPK1Q86Z02 1210 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 NKAIN4Q8IVV8 208 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SLC30A8Q8IWU4 369 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SVOPLQ8N434 492 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 FGFBP3Q8TAT2 258 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 C10orf82Q8WW14 230 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 PROX1Q92786 737 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 HIST1H2ACQ93077 130 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 FOXN4Q96NZ1 517 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 ZNF317Q96PQ6 595 aaPredicted RBP8.31□□□□□ -1.08
MSH5-218ENST00000494646 KCNK17Q96T54 332 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 PRSS27Q9BQR3 290 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 OCSTAMPQ9BR26 566 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 SIKE1Q9BRV8 207 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 ULBP2Q9BZM5 246 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 NOX3Q9HBY0 568 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 B3GAT2Q9NPZ5 323 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 NANSQ9NR45 359 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 FGFR1OP2Q9NVK5 253 aa8.31□□□□□ -1.08
MSH5-218ENST00000494646 ATRQ13535 2644 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms