RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 A0A1B0GVL5 298 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 A8MUA0 341 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 A8MXQ7 604 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 F5H6K3 240 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 SURF6O75683 361 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 TNFSF13O75888 250 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 BBOX1O75936 387 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 SCGNO76038 276 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 IGLV1-47P01700 117 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 GIPP09681 153 aaPredicted RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 POU2F1P14859 743 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 CCR1P32246 355 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 DRD3P35462 400 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 MAP3K8P41279 467 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 QARSP47897 775 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 GPM6AP51674 278 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 EFNB2P52799 333 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 CKAP4Q07065 602 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 KLRC3Q07444 240 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 OXA1LQ15070 435 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 DUSP7Q16829 419 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 CCDC14Q49A88 953 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 CARD16Q5EG05 197 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 KLF17Q5JT82 389 aaPredicted RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 TIGD3Q6B0B8 471 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 TMIGD1Q6UXZ0 262 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 DHDDSQ86SQ9 333 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 MFSD6LQ8IWD5 586 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 ZCCHC7Q8N3Z6 543 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 EIF1ADQ8N9N8 165 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 C20orf203Q8NBC4 194 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 OR8J1Q8NGP2 316 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 BRSK1Q8TDC3 778 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 UBE2E3Q969T4 207 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 SEC22AQ96IW7 307 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 RAB34Q9BZG1 259 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 ADAM28Q9UKQ2 775 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 RRP15Q9Y3B9 282 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 DDX49Q9Y6V7 483 aaKnown RBP3.03□□□□□ -1.92
SMC4-224ENST00000494612 ADAMTS7Q9UKP4 1686 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 CASP8AP2Q9UKL3 1982 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 TRPM7Q96QT4 1865 aa3.03□□□□□ -1.93
SMC4-224ENST00000494612 SLX4Q8IY92 1834 aa3.03□□□□□ -1.93
SMC4-224ENST00000494612 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 IGHV3OR16-13A0A075B7E8 117 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 RBMY1BA6NDE4 496 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 BTBD17A6NE02 478 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 RBMY1EA6NEQ0 496 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 H0Y9J4 135 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 GFYI3L273 518 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 FOXE1O00358 373 aaPredicted RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 ZNF861PO60384 105 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KLK3P07288 261 aaPredicted RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 RBMY1DP0C7P1 496 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 RBMY1A1P0DJD3 496 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 GRIA1P42261 906 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 VDAC2P45880 294 aaPredicted RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 KLRB1Q12918 225 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 UNC119Q13432 240 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 SFT2D3Q587I9 215 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 MARCH8Q5T0T0 291 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 CENPPQ6IPU0 288 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KDELC1Q6UW63 502 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 Q6ZPB1 254 aaPredicted RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 ZNF679Q8IYX0 411 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 PNKDQ8N490 385 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 ACOT4Q8N9L9 421 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 OR9G1Q8NH87 305 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 FBXO30Q8TB52 745 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 C10orf35Q96D05 121 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 CXorf40BQ96DE9 158 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 TMEM101Q96IK0 257 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 COPS8Q99627 209 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 NANOGQ9H9S0 305 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 BFARQ9NZS9 450 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 MTRF1LQ9UGC7 380 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 ASF1AQ9Y294 204 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 RPL36Q9Y3U8 105 aaKnown RBP3.02□□□□□ -1.93
SMC4-224ENST00000494612 IKBKGQ9Y6K9 419 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 FRMPD3Q5JV73 1810 aa3.02□□□□□ -1.93
SMC4-224ENST00000494612 SCN7AQ01118 1682 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 SH3TC1Q8TE82 1336 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 SYNJ2BP-COX16A0A087WUM0 186 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 IGHV1OR21-1A0A087WYE8 117 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 PSMB11A5LHX3 300 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 PANO1I0J062 215 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 TRAF3IP2O43734 574 aaPredicted RBP3.01□□□□□ -1.93
SMC4-224ENST00000494612 RAMP3O60896 148 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 IGHG4P01861 327 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 HTR1EP28566 365 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 BTCP35070 178 aa3.01□□□□□ -1.93
SMC4-224ENST00000494612 TNNT2P45379 298 aaPredicted RBP3.01□□□□□ -1.93
SMC4-224ENST00000494612 CCT3P49368 545 aaKnown RBP3.01□□□□□ -1.93
SMC4-224ENST00000494612 NCBP1Q09161 790 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms