RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TATDN3Q17R31 274 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF528Q3MIS6 628 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CDONQ4KMG0 1287 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ACSM3Q53FZ2 586 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RPL22L1Q6P5R6 122 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 KIRREL2Q6UWL6 708 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 B3GLCTQ6Y288 498 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CEACAM19Q7Z692 300 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PXKQ7Z7A4 578 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SLC35F2Q8IXU6 374 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SLC22A18ASQ8N1D0 253 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CADM2Q8N3J6 435 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SAMD12Q8N8I0 201 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 Q8N9G6 341 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ASCC1Q8N9N2 400 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 FAM98AQ8NCA5 519 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 C7orf57Q8NEG2 295 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 C1orf162Q8NEQ5 155 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 OR4M1Q8NGD0 313 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 OR52E2Q8NGJ4 325 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 OR9A4Q8NGU2 314 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 OR51A7Q8NH64 312 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 TRMT10AQ8TBZ6 339 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 HAVCR2Q8TDQ0 301 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 DOK4Q8TEW6 326 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RIT1Q92963 219 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 TRIM63Q969Q1 353 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CREB3L1Q96BA8 519 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RBM18Q96H35 190 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RNF170Q96K19 258 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 C4orf36Q96KX1 117 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ART5Q96L15 291 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PGLYRP3Q96LB9 341 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 VSTM2LQ96N03 204 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ERMAPQ96PL5 475 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 C7orf50Q9BRJ6 194 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 WACQ9BTA9 647 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SLC19A3Q9BZV2 496 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 NDEL1Q9GZM8 345 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 HDHD2Q9H0R4 259 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 TCEAL2Q9H3H9 227 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 NIPAL2Q9H841 368 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 UCK1Q9HA47 277 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 FAM60AQ9NP50 221 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 B3GAT2Q9NPZ5 323 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RXFP3Q9NSD7 469 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PRODH2Q9UF12 536 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 NUFIP1Q9UHK0 495 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 TEKT2Q9UIF3 430 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ST6GALNAC2Q9UJ37 374 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RASD1Q9Y272 281 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SLC6A5Q9Y345 797 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF337Q9Y3M9 751 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SIRT4Q9Y6E7 314 aaPredicted RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 EXPH5Q8NEV8 1989 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PIEZO2Q9H5I5 2752 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 DSPP15924 2871 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ZZEF1O43149 2961 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SPTBP11277 2137 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PCDH15Q96QU1 1955 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A0A0A6YYC8 382 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A0A0B4J293 547 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A0A0G2JMP0 313 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A0A0X1KG70 313 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A0A1B0GTQ1 180 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 SYNDIG1LA6NDD5 238 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 LILRA5A6NI73 299 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR6C70A6NIJ9 312 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 SLC9B1P1A6NJY1 282 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 A8MV72 311 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF879B4DU55 563 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 E9PI62 339 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 INMT-MINDY4F8WBC2 141 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 I3L1I5 382 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 K7ESF4 209 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 IMPA2O14732 288 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PDCD5O14737 125 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CTDSPLO15194 276 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FLRT2O43155 660 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF749O43361 778 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FOXS1O43638 330 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FZD7O75084 574 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GLCEO94923 617 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 UBL3O95164 117 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 IL33O95760 270 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 DHFRP00374 187 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 C1QBP02746 253 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TFP02787 698 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PRB1P04280 392 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 EIF4EP06730 217 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 NGFRP08138 427 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 UCHL1P09936 223 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CLUP10909 449 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PNMTP11086 282 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms