RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 LRR1Q96L50 414 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZIM3Q96PE6 472 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 EMC6Q9BV81 110 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 PPCSQ9HAB8 311 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 B3GAT2Q9NPZ5 323 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF69Q9UC07 566 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 GPR160Q9UJ42 338 aa13.99□□□□□ -0.17
APOBEC3F-203ENST00000476513 IGLV3-9A0A075B6K5 115 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 E9PBE3 544 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 HPRP00739 348 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 PATE4P0C8F1 98 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 FAM157BP0CG42 384 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 HLA-DOBP13765 273 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 GRPRP30550 384 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 CDKN2CP42773 168 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 KLF3P57682 345 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 SELENOVP59797 346 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 HOXC5Q00444 222 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 BAMBIQ13145 260 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 OCLNQ16625 522 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 FAM69AQ5T7M9 428 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 TREML1Q86YW5 311 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 WDFY1Q8IWB7 410 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 UEVLDQ8IX04 471 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 BCL6BQ8N143 479 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 TRIML2Q8N7C3 387 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 SYT14Q8NB59 555 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 FGFBP3Q8TAT2 258 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 SNX33Q8WV41 574 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 GTF3AQ92664 365 aaKnown RBP13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 RAB1CQ92928 201 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 C16orf45Q96MC5 204 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 PANX1Q96RD7 426 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 FOXB1Q99853 325 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 FBXL3Q9UKT7 428 aa13.98□□□□□ -0.17
APOBEC3F-203ENST00000476513 MS4A18H0YCH9 400 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 OR2T1O43869 369 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 UBL3O95164 117 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 SERPINA5P05154 406 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 RNASE1P07998 156 aaKnown RBP13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF250P15622 560 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 CBLP22681 906 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 LARS2Q15031 903 aaKnown RBP13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 MS4A18Q3C1V0 323 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF621Q6ZSS3 439 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ADPRHL1Q8NDY3 354 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 SYNPRQ8TBG9 265 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 TIMD4Q96H15 378 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 TXNDC15Q96J42 360 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 TEX37Q96LM6 180 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF48Q96MX3 618 aaPredicted RBP13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 GPA33Q99795 319 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 GAL3ST1Q99999 423 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ULBP2Q9BZM5 246 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 SLCO1C1Q9NYB5 712 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 P2RX2Q9UBL9 471 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 NUP50Q9UKX7 468 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 ARHGAP32A7KAX9 2087 aa13.97□□□□□ -0.17
APOBEC3F-203ENST00000476513 IGKV1D-42A0A075B6H8 117 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 SLC22A23A1A5C7 686 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 TPD52L2O43399 206 aaKnown RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF500O60304 480 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 SPAG7O75391 227 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 BCHEP06276 602 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 ERVS71-1P61550 626 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 HFEQ30201 348 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 ARMCX4Q5H9R4 360 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 RPS26P11Q5JNZ5 115 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 KLF17Q5JT82 389 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 C6orf89Q6UWU4 347 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 NHLRC1Q6VVB1 395 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 SKA3Q8IX90 412 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 DEFB108BQ8NET1 73 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 OR6N1Q8NGY5 312 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 TCP10LQ8TDR4 215 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 POP5Q969H6 163 aaKnown RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 SLC38A4Q969I6 547 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 OR51B6Q9H340 312 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 DECR2Q9NUI1 292 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 PLEK2Q9NYT0 353 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 CALML5Q9NZT1 146 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 LEF1Q9UJU2 399 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
APOBEC3F-203ENST00000476513 PPIAL4EA0A075B759 164 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 PPIAL4CA0A0B4J2A2 164 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 PPIAL4DF5H284 164 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 PPIAL4FP0DN26 164 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 CCL2P13500 99 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 MDKP21741 143 aaPredicted RBP13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 GCH1P30793 250 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 ATP4BP51164 291 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 MVDP53602 400 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 CRISP3P54108 245 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 NME5P56597 212 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 CAMK2DQ13557 499 aa13.95□□□□□ -0.18
APOBEC3F-203ENST00000476513 TSTQ16762 297 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms