RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PAQR5Q9NXK6 330 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-227ENST00000475832 ZNF346Q9UL40 294 aaKnown RBP10.98□□□□□ -0.65
MRPL55-227ENST00000475832 MOKQ9UQ07 419 aa10.98□□□□□ -0.65
MRPL55-227ENST00000475832 EXOSC1Q9Y3B2 195 aaKnown RBP10.98□□□□□ -0.65
MRPL55-227ENST00000475832 SPENQ96T58 3664 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 AQP7P3A6NL99 342 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 EIF1AYO14602 144 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 MYL12BO14950 172 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ARHGEF9O43307 516 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 AKAP8O43823 692 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 AHCYL1O43865 530 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 GLSO94925 669 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ACTL6AO96019 429 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 PLGP00747 810 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 STSP08842 583 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 NR2C1P13056 603 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ZNF43P17038 809 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 JUNBP17275 347 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ENPP1P22413 925 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 SLC15A1P46059 708 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 BLVRAP53004 296 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 SLC25A1P53007 311 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 CARD18P57730 90 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 B3GALT5-AS1P59052 145 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 FOXK1P85037 733 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 HSF1Q00613 529 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 POU3F1Q03052 451 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 PIGFQ07326 219 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 NFATC3Q12968 1075 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 TBCEQ15813 527 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ACKR1Q16570 336 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ZNF239Q16600 458 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 IGFL3Q6UXB1 125 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 SLC35D2Q76EJ3 337 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 CHMP1BQ7LBR1 199 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 FAM122BQ7Z309 247 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 BCDIN3DQ7Z5W3 292 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 EXD3Q8N9H8 876 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 OR2V1Q8NHB1 315 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 RELTQ969Z4 430 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 RASD2Q96D21 266 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 MRPL48Q96GC5 212 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 OXGR1Q96P68 337 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 NMNAT3Q96T66 252 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 CDCA4Q9BXL8 241 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 RACGAP1Q9H0H5 632 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 FGF20Q9NP95 211 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 ACKR4Q9NPB9 350 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 FANCFQ9NPI8 374 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 TNFRSF10DQ9UBN6 386 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 DIMT1Q9UNQ2 313 aaKnown RBP10.97□□□□□ -0.65
MRPL55-227ENST00000475832 COMMD3-BMI1R4GMX3 469 aa10.97□□□□□ -0.65
MRPL55-227ENST00000475832 LOC102725191A0A1B0GVB3 256 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 DPPA5A6NC42 116 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 CCDC160A6NGH7 325 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ZNF726A6NNF4 738 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-227ENST00000475832 NPIPA2E9PIF3 369 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 NPIPA3F8WFD2 350 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 MS4A18H0YCH9 400 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 TNFSF11O14788 317 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 TFECO14948 347 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-227ENST00000475832 CRABP1P29762 137 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 RFC3P40938 356 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 MAGEA5P43359 124 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ALDH3B2P48448 385 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 GFRA1P56159 465 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 RAC3P60763 192 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ACTC1P68032 377 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ACTA1P68133 377 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 EMX1Q04741 257 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-227ENST00000475832 BCL2A1Q16548 175 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 MS4A18Q3C1V0 323 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 NADK2Q4G0N4 442 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 RNLSQ5VYX0 342 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 GTF2IRD2BQ6EKJ0 949 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ASB18Q6ZVZ8 466 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 GPAT4Q86UL3 456 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 GTF2IRD2Q86UP8 949 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 UBQLNLQ8IYU4 475 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 TMEM99Q8N816 258 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 POMGNT2Q8NAT1 580 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 NPEPL1Q8NDH3 523 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 PROKR2Q8NFJ6 384 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 FNDC8Q8TC99 324 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 PTP4A1Q93096 173 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-227ENST00000475832 LGALS12Q96DT0 336 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ADAD1Q96M93 576 aaKnown RBP10.96□□□□□ -0.65
MRPL55-227ENST00000475832 TEAD3Q99594 435 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 MND1Q9BWT6 205 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 MED20Q9H944 212 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 ACOT13Q9NPJ3 140 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 INPP5EQ9NRR6 644 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 SEC14L4Q9UDX3 406 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
MRPL55-227ENST00000475832 UBR5O95071 2799 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms