RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 FAM86B1Q8N7N1 296 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 IPMKQ8NFU5 416 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 OR10G9Q8NGN4 311 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 MCOLN3Q8TDD5 553 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 UFD1Q92890 307 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 EXOSC8Q96B26 276 aaKnown RBP2.24□□□□□ -2.05
LTN1-204ENST00000475344 ITCHQ96J02 903 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 CCT7Q99832 543 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 MRPL45Q9BRJ2 306 aaKnown RBP2.24□□□□□ -2.05
LTN1-204ENST00000475344 RIOK2Q9BVS4 552 aaKnown RBP2.24□□□□□ -2.05
LTN1-204ENST00000475344 GORASP2Q9H8Y8 452 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 ZFP14Q9HCL3 533 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 BFARQ9NZS9 450 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 OR12D3Q9UGF7 316 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 CDH9Q9ULB4 789 aa2.24□□□□□ -2.05
LTN1-204ENST00000475344 TCRBV9S1A1TA0A576 114 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 GOLGA8SH3BPF8 625 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 MTX2O75431 263 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 RNASE2P10153 161 aaKnown RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 CELP19835 753 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 GDI1P31150 447 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 BTCP35070 178 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 EPS15P42566 896 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 ERVK-25P63136 954 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 IL24Q13007 206 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 OR5I1Q13606 314 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 C19orf35Q6ZS72 473 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 CALHM3Q86XJ0 350 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 PLA2G4DQ86XP0 818 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 FNDC5Q8NAU1 212 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 OR4F15Q8NGB8 312 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 OR5D13Q8NGL4 314 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 MAGEE2Q8TD90 523 aaPredicted RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 ZFP90Q8TF47 636 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 ACOT11Q8WXI4 607 aaPredicted RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 SMARCD2Q92925 531 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 SLC38A2Q96QD8 506 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 COPS8Q99627 209 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 TMEM246Q9BRR3 403 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 CAPS2Q9BXY5 557 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 VCX2Q9H322 139 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 AZI2Q9H6S1 392 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 RNF167Q9H6Y7 350 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 LRRC40Q9H9A6 602 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 MCCC2Q9HCC0 563 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 THUMPD1Q9NXG2 353 aaKnown RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 KCNIP1Q9NZI2 227 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 ZNF629Q9UEG4 869 aaPredicted RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 ZNF222Q9UK12 451 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 ADAM28Q9UKQ2 775 aa2.23□□□□□ -2.05
LTN1-204ENST00000475344 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
LTN1-204ENST00000475344 TUBGCP6Q96RT7 1819 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 TRAV40A0A0B4J280 105 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 C7orf66A4D0T2 115 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 RBMY1BA6NDE4 496 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 RBMY1EA6NEQ0 496 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 OR5B21A6NL26 309 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 C12orf71A8MTZ7 269 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 SLC31A2O15432 143 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 ZNF208O43345 1280 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 OXSR1O95747 527 aaPredicted RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 TSPAN12O95859 305 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 CISD3P0C7P0 127 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 RBMY1DP0C7P1 496 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 RBMY1A1P0DJD3 496 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 HPGDP15428 266 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 CNR1P21554 472 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 HMGB2P26583 209 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 CACNG7P62955 275 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 OGDHQ02218 1023 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 CHIT1Q13231 466 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 SF3A2Q15428 464 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 CYTH1Q15438 398 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 ZNF880Q6PDB4 577 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 LRP11Q86VZ4 500 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 TRIM69Q86WT6 500 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 NUDCD3Q8IVD9 361 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 ZNF547Q8IVP9 402 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 OR52H1Q8NGJ2 320 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 OR1N2Q8NGR9 330 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 OXGR1Q96P68 337 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 MTMR9Q96QG7 549 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 DNTTIP1Q9H147 329 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 DEFB127Q9H1M4 99 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 GBA3Q9H227 469 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 GIN1Q9NXP7 522 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 QPCTLQ9NXS2 382 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 SEC14L3Q9UDX4 400 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 PTBP2Q9UKA9 531 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 PIGLQ9Y2B2 252 aa2.22□□□□□ -2.05
LTN1-204ENST00000475344 FBN1P35555 2871 aaKnown RBP2.22□□□□□ -2.05
LTN1-204ENST00000475344 IGSF9BQ9UPX0 1349 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 PLA2R1Q13018 1463 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 NSG1A0A0A6YYJ2 146 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 FAM240BA0A1B0GVZ2 78 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 SNTNA6NMZ2 147 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 HSD17B6O14756 317 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 RCBTB2O95199 551 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 IGLV2-23P01705 113 aa2.21□□□□□ -2.06
LTN1-204ENST00000475344 FGF1P05230 155 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms