RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NELFAQ9H3P2 528 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 INIPQ9NRY2 104 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 JKAMPQ9P055 326 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 Q9UFV3 132 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 CLEC4AQ9UMR7 237 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 NBASA2RRP1 2371 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SLC35F4A4IF30 521 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 H7C1C5 153 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 WDR1O75083 606 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 PLGP00747 810 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 RNF224P0DH78 156 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ACVR2AP27037 513 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 AGTR1P30556 359 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SDHAP31040 664 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ARHGDIAP52565 204 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 NUP107P57740 925 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SNRPGP62308 76 aaKnown RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 LCN6P62502 163 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 POU3F1Q03052 451 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 RASGEF1BQ0VAM2 473 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ITGADQ13349 1161 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 CRMP1Q14194 572 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 MAD2L1BPQ15013 274 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 C1orf185Q5T7R7 199 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 WLSQ5T9L3 541 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SLC27A4Q6P1M0 643 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF585AQ6P3V2 769 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SLC25A47Q6Q0C1 308 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 LYPD4Q6UWN0 246 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 B3GNT6Q6ZMB0 384 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 C22orf34Q6ZV56 151 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SLC35D2Q76EJ3 337 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 NANOGNBQ7Z5D8 188 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 BTLAQ7Z6A9 289 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZBTB46Q86UZ6 589 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 C20orf196Q8IYI0 205 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 RELL2Q8NC24 303 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 RNF166Q96A37 237 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF570Q96NI8 536 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SNX18Q96RF0 628 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 TRIB1Q96RU8 372 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 NMNAT3Q96T66 252 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF184Q99676 751 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 RIBC2Q9H4K1 309 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 MED20Q9H944 212 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 GP6Q9HCN6 339 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 PLSCR4Q9NRQ2 329 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 PAK1IP1Q9NWT1 392 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 PAQR5Q9NXK6 330 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-207ENST00000471342 GPR52Q9Y2T5 361 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 MEMO1Q9Y316 297 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 NOX1Q9Y5S8 564 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF462Q96JM2 2506 aa8.74□□□□□ -1.01
SF3A1-207ENST00000471342 SVILO95425 2214 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 SLC22A20A6NK97 555 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 FAM183AA6NL82 134 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 PRR32B1ATL7 298 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 IDH3BO43837 385 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 VAMP5O95183 116 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 GPANK1O95872 356 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 GAAP10253 952 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ACADSP16219 412 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 CTLA4P16410 223 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 POU1F1P28069 291 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 SLC6A6P31641 620 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 OPRM1P35372 400 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 PCYT1AP49585 367 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 BIDP55957 195 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 CLDN17P56750 224 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 MYBPC1Q00872 1141 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 MVKQ03426 396 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 TLE1Q04724 770 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 FMODQ06828 376 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 GTF3C1Q12789 2109 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 CDK5R2Q13319 367 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 TSPO2Q5TGU0 170 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 EEF1A1P5Q5VTE0 462 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF474Q6S9Z5 364 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-207ENST00000471342 UGT2A3Q6UWM9 527 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 TFAP2EQ6VUC0 442 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 B3GLCTQ6Y288 498 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 RRM2BQ7LG56 351 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 CDK20Q8IZL9 346 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 DHRSXQ8N5I4 330 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 C10orf53Q8N6V4 93 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 CYB561A3Q8NBI2 242 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 OR2T33Q8NG76 320 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 OR52E2Q8NGJ4 325 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 OR4K13Q8NH42 304 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 NABP1Q96AH0 204 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 SLC25A44Q96H78 314 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-207ENST00000471342 BOD1Q96IK1 185 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ERMAPQ96PL5 475 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-207ENST00000471342 FN3KQ9H479 309 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 MARCH7Q9H992 704 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 SLC7A10Q9NS82 523 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 MRPS18AQ9NVS2 196 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms