RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 FOXF1Q12946 379 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ITGADQ13349 1161 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 TSC22D1Q15714 1073 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 TOMM34Q15785 309 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 MICAQ29983 383 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ELOA3BQ3SY89 546 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 CHRFAM7AQ494W8 412 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 LINC00114Q6XXX2 140 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ZBTB49Q6ZSB9 765 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 Q6ZT83 130 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 FCRLAQ7L513 359 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 RRM2BQ7LG56 351 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 SSX8Q7RTT4 187 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ATG4DQ86TL0 474 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 EPHX4Q8IUS5 362 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 NKAIN4Q8IVV8 208 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 TUSC5Q8IXB3 177 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 RNF113BQ8IZP6 322 aaKnown RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 PACRGLQ8N7B6 248 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ELOA3Q8NG57 546 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 OR10G2Q8NGC3 310 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 OR52J3Q8NH60 311 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 RNF217Q8TC41 542 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 GIPC3Q8TF64 312 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 DNAJC9Q8WXX5 260 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 KISS1RQ969F8 398 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 CIB1Q99828 191 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 RBM4BQ9BQ04 359 aaKnown RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 KLHDC3Q9BQ90 382 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 PRSS27Q9BQR3 290 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM43Q9BTV4 400 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF426Q9BUY5 554 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 RBM4Q9BWF3 364 aaKnown RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 SRXN1Q9BYN0 137 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 SLC19A3Q9BZV2 496 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 COQ10BQ9H8M1 238 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 BCO1Q9HAY6 547 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 YAE1D1Q9NRH1 226 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 FAIMQ9NVQ4 179 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 PDP1Q9P0J1 537 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 OSGIN1Q9UJX0 560 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ABCA1O95477 2261 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 PRR14LQ5THK1 2151 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 A0A087WUU8 490 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 DPRXA6NFQ7 191 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 SHISA9B4DS77 424 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF814B7Z6K7 855 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 EFNA2O43921 213 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 NTN1O95631 604 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 HPRP00739 348 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 F12P00748 615 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ADAP00813 363 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 IGF2P01344 180 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 CD8AP01732 235 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ANXA8P13928 327 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 CXCR1P25024 350 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 FKBP2P26885 142 aaKnown RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 VHLP40337 213 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 APOBEC1P41238 236 aaKnown RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 OR3A2P47893 321 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 MERTKQ12866 999 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 FAPQ12884 760 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 PPP1R8Q12972 351 aaKnown RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 OTUD3Q5T2D3 398 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 C6orf52Q5T4I8 152 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 LPCAT4Q643R3 524 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TTC33Q6PID6 262 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 C5orf46Q6UWT4 87 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF730Q6ZMV8 503 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 WDR88Q6ZMY6 472 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 MBOAT2Q6ZWT7 520 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 BHLHA15Q7RTS1 189 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM179BQ7Z7N9 219 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 SLC43A2Q8N370 569 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 CBR4Q8N4T8 237 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 OR4K5Q8NGD3 323 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM255BQ8WV15 326 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM239Q8WW34 195 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 NRG4Q8WWG1 115 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF524Q96C55 264 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM160Q9NX00 188 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 USE1Q9NZ43 259 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 CISD1Q9NZ45 108 aaKnown RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 KIF17Q9P2E2 1029 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 GDF2Q9UK05 429 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 ING1Q9UK53 422 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 MGAT4BQ9UQ53 548 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM5Q9Y2B1 443 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 MED31Q9Y3C7 131 aa7.99□□□□□ -1.13
SF3A1-206ENST00000471037 SPIN1Q9Y657 262 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-206ENST00000471037 TMED7-TICAM2A0A0A6YYA0 188 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 PDLIM1O00151 329 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 EI24O14681 340 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF208O43345 1280 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 OR10H3O60404 316 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 FAM157CP0CG43 387 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 COX5AP20674 150 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 FUT4P22083 530 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms