RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 C9orf43Q8TAL5 461 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ASB10Q8WXI3 467 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 MYDGFQ969H8 173 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 SARAFQ96BY9 339 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 INTS12Q96CB8 462 aaKnown RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TEAD3Q99594 435 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 JAM3Q9BX67 310 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 CDCA4Q9BXL8 241 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 SRXN1Q9BYN0 137 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 LDAHQ9H6V9 325 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 FGF20Q9NP95 211 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 AASSQ9UDR5 926 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 EXOGQ9Y2C4 368 aaKnown RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 FKBP7Q9Y680 259 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TEX13CA0A0J9YWL9 993 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF716A6NP11 495 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 C11orf98E9PRG8 122 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 H0YC42 278 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 M0R129 80 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 XKRYO14609 159 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 SMAD9O15198 467 aaKnown RBP11.37□□□□□ -0.59
TRAF4-208ENST00000469529 XPNPEP2O43895 674 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 CXCL13O43927 109 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 HLA-DOBP13765 273 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 IFNGR1P15260 489 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 DCKP27707 260 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 MTNR1AP48039 350 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF133P52736 654 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-208ENST00000469529 LGALS3BPQ08380 585 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 KRR1Q13601 381 aaKnown RBP11.37□□□□□ -0.59
TRAF4-208ENST00000469529 BLMHQ13867 455 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 HIST3H3Q16695 136 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 MESTQ5EB52 335 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 EEF1A1P5Q5VTE0 462 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 PLBD1Q6P4A8 553 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 IGFN1Q86VF2 1251 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 PM20D2Q8IYS1 436 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 NMD3Q96D46 503 aaKnown RBP11.37□□□□□ -0.59
TRAF4-208ENST00000469529 SLC25A44Q96H78 314 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-208ENST00000469529 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 NMNAT3Q96T66 252 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 GPR52Q9Y2T5 361 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 ATMQ13315 3056 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 EML6Q6ZMW3 1958 aa11.37□□□□□ -0.59
TRAF4-208ENST00000469529 COL6A6A6NMZ7 2263 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 SLC22A23A1A5C7 686 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF724A8MTY0 619 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 NPIPA5E9PKD4 350 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 J3QRE1 110 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 GPR171O14626 319 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 FAM20BO75063 409 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF432O94892 652 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 RENP00797 406 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 CDK1P06493 297 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 HTR1AP08908 422 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 FAM87AP0C7U9 286 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 SMIM18P0DKX4 95 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 DBTP11182 482 aaKnown RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 NR2C1P13056 603 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 JUNBP17275 347 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 CRABP1P29762 137 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 ACVR1BP36896 505 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 EIF1AXP47813 144 aaKnown RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 PMP22Q01453 160 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF91Q05481 1191 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 POU4F2Q12837 409 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 C1DQ13901 141 aaKnown RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 GGTLC2Q14390 218 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 IRF3Q14653 427 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 PON3Q15166 354 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 SF3B4Q15427 424 aaKnown RBP eCLIP11.36□□□□□ -0.593e-9■■■■□ 19.5
TRAF4-208ENST00000469529 THEM4Q5T1C6 240 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 GTF2IRD2BQ6EKJ0 949 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 NIPAL3Q6P499 406 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 GTF2IRD2Q86UP8 949 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 JAZF1Q86VZ6 243 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 LSRQ86X29 649 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 KDM8Q8N371 416 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 OR9K2Q8NGE7 335 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 OR2T4Q8NH00 348 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 SMPDL3BQ92485 455 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 TMEM45BQ96B21 275 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 GPR137Q96N19 417 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 COPS4Q9BT78 406 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 HCAR1Q9BXC0 346 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 MRPS26Q9BYN8 205 aaKnown RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 MARCH7Q9H992 704 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 BCO1Q9HAY6 547 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 PAK1IP1Q9NWT1 392 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 DNAJC27Q9NZQ0 273 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms