RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 B3GNT2Q9NY97 397 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 MRPL39Q9NYK5 338 aaKnown RBP16.56■□□□□ 0.24
COL9A3-206ENST00000466532 POFUT2Q9Y2G5 429 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF726A6NNF4 738 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 SERPINI2O75830 405 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 MFN2O95140 757 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 TGFAP01135 160 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 AHCYP23526 432 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 PIGFQ07326 219 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
COL9A3-206ENST00000466532 DLEU7Q6UYE1 221 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 WDFY1Q8IWB7 410 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 CDK20Q8IZL9 346 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 SMYD1Q8NB12 490 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 OR6N1Q8NGY5 312 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 DYDC1Q8WWB3 177 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 MS4A3Q96HJ5 214 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 ULBP2Q9BZM5 246 aa16.55■□□□□ 0.24
COL9A3-206ENST00000466532 LRP5LA4QPB2 252 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 M0R3H8 397 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 PLPP3O14495 311 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 B4GALT1P15291 398 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 HNF1AP20823 631 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 NR4A1P22736 598 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 GIFP27352 417 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 THBS2P35442 1172 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 NHLRC1Q6VVB1 395 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF627Q7L945 461 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 PXKQ7Z7A4 578 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 SNX32Q86XE0 403 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 PTOV1Q86YD1 416 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 C11orf65Q8NCR3 313 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 MCHR1Q99705 422 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 FOXB1Q99853 325 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 SOX7Q9BT81 388 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 RABEP2Q9H5N1 569 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 LEF1Q9UJU2 399 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-206ENST00000466532 CMAHPQ9Y471 501 aa16.54■□□□□ 0.24
COL9A3-206ENST00000466532 C11orf98E9PRG8 122 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 OPN1SWP03999 348 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 IGFBP1P08833 259 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ADRA2AP08913 450 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ADORA3P0DMS8 318 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF14P17017 642 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-206ENST00000466532 PTDSS1P48651 473 aaKnown RBP16.53■□□□□ 0.24
COL9A3-206ENST00000466532 CHN2P52757 468 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 PCBP3P57721 371 aaKnown RBP16.53■□□□□ 0.24
COL9A3-206ENST00000466532 CYP51A1Q16850 503 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 KRTAP24-1Q3LI83 254 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF613Q6PF04 617 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 DHDDSQ86SQ9 333 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF786Q8N393 782 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 OR5J2Q8NH18 312 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 UBASH3BQ8TF42 649 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ATP6V1G3Q96LB4 118 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF75AQ96N20 296 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 ARHGDIGQ99819 225 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
COL9A3-206ENST00000466532 CPSF4LA6NMK7 179 aaKnown RBP16.52■□□□□ 0.24
COL9A3-206ENST00000466532 CHP2O43745 196 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 FMO6PO60774 539 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 TACSTD2P09758 323 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 CSNK1A1P48729 337 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 BIDP55957 195 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 MTPNP58546 118 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 RBBP4Q09028 425 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 DUSP7Q16829 419 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 TRMT5Q32P41 509 aaKnown RBP16.52■□□□□ 0.24
COL9A3-206ENST00000466532 LINC00114Q6XXX2 140 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 MRPL24Q96A35 216 aaKnown RBP16.52■□□□□ 0.24
COL9A3-206ENST00000466532 MRPL37Q9BZE1 423 aaKnown RBP16.52■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF224Q9NZL3 707 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 SPEF1Q9Y4P9 236 aa16.52■□□□□ 0.24
COL9A3-206ENST00000466532 M0QX08 132 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 ANGPT2O15123 496 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 LILRA1O75019 489 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 OR6A2O95222 327 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 RAB36O95755 333 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 C8BP07358 591 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 ZNF35P13682 527 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 IFNGR1P15260 489 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 APEX1P27695 318 aaKnown RBP16.51■□□□□ 0.23
COL9A3-206ENST00000466532 IL2RGP31785 369 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 GIPRP48546 466 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 RAB1AP62820 205 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 SELPLGQ14242 412 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 NPTX1Q15818 432 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 MSMPQ1L6U9 139 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 TTMPQ5BVD1 217 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 GPR32P1Q8NGA4 272 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 OR6T1Q8NGN1 323 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 THOC1Q96FV9 657 aaKnown RBP16.51■□□□□ 0.23
COL9A3-206ENST00000466532 SNX18Q96RF0 628 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 CGREF1Q99674 301 aa16.51■□□□□ 0.23
COL9A3-206ENST00000466532 DENND2DQ9H6A0 471 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-206ENST00000466532 LYNX1G3V0Z9 82 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms