RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DNAJA3Q96EY1 480 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 RBP7Q96R05 134 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 YTHDF1Q9BYJ9 559 aaKnown RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 PNPLA3Q9NST1 481 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 CLN6Q9NWW5 311 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 H2AFY2Q9P0M6 372 aaPredicted RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 KLHL13Q9P2N7 655 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 SEC14L4Q9UDX3 406 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 IL20RAQ9UHF4 553 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ZNF346Q9UL40 294 aaKnown RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 PCNX3Q9H6A9 2034 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 DNAJC13O75165 2243 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 PRSS37A4D1T9 235 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 ZNF814B7Z6K7 855 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 PRR23D1E9PI22 279 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 TLX2O43763 284 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 WISP2O76076 250 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 AQP8O94778 261 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 PLGP00747 810 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 PRR23D2P0DMB1 279 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 HIST1H1CP16403 213 aaKnown RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 CRABP1P29762 137 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ACVR1BP36896 505 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 IL5RAQ01344 420 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ITGADQ13349 1161 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 MAD2L1BPQ15013 274 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 TMEM201Q5SNT2 666 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ZNF362Q5T0B9 420 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 THEM4Q5T1C6 240 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 C1orf185Q5T7R7 199 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 RIPPLY2Q5TAB7 128 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 TMEM211Q6ICI0 200 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 DNM1P34Q6PK57 102 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 B3GNT6Q6ZMB0 384 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 IGFN1Q86VF2 1251 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 GID4Q8IVV7 300 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 KDM8Q8N371 416 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 IQCF1Q8N6M8 205 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 TCEANCQ8N8B7 351 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ZIC4Q8N9L1 334 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 NPEPL1Q8NDH3 523 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 OR52E2Q8NGJ4 325 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 OR5M9Q8NGP3 310 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 OR2T4Q8NH00 348 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 ABHD3Q8WU67 409 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ASB10Q8WXI3 467 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 ZNF566Q969W8 418 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 RELTQ969Z4 430 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 Q96M85 177 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 TRIB1Q96RU8 372 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 DDOQ99489 341 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 MRPL13Q9BYD1 178 aaKnown RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 VSX1Q9NZR4 365 aaPredicted RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 TNFRSF10DQ9UBN6 386 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 MOKQ9UQ07 419 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 NOSIPQ9Y314 301 aaKnown RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 ADAM18Q9Y3Q7 739 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 FLVCR1Q9Y5Y0 555 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 EML6Q6ZMW3 1958 aa9.5□□□□□ -0.89
RTF1-202ENST00000462276 TNRC6AQ8NDV7 1962 aaKnown RBP9.5□□□□□ -0.89
RTF1-202ENST00000462276 POLEQ07864 2286 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 MED12Q93074 2177 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 IGHV3-15A0A0B4J1V0 119 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 TEX13CA0A0J9YWL9 993 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 SLC35F4A4IF30 521 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 ARHGEF9O43307 516 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 RAMP1O60894 148 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 SLC43A1O75387 559 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 MRPL33O75394 65 aaKnown RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 ZNF432O94892 652 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 CNOT4O95628 575 aaKnown RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 TGM6O95932 706 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 IL2RAP01589 272 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 GNAO1P09471 354 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 HLA-DOBP13765 273 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 BIDP55957 195 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 CLDN17P56750 224 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.49□□□□□ -0.89
RTF1-202ENST00000462276 CDK5R2Q13319 367 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 TOP3AQ13472 1001 aaPredicted RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 STK11Q15831 433 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 C3AR1Q16581 482 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 SLC35D3Q5M8T2 416 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 SLC35F1Q5T1Q4 408 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 NXNL2Q5VZ03 156 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 AAED1Q7RTV5 226 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 CD163Q86VB7 1156 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 DOLPP1Q86YN1 238 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 CCDC71Q8IV32 467 aaPredicted RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 ENTHD1Q8IYW4 607 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 POMGNT2Q8NAT1 580 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 OR4K13Q8NH42 304 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 TXNDC15Q96J42 360 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms