RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ZNF75AQ96N20 296 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ALG12Q9BV10 488 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ESRP2Q9H6T0 727 aaKnown RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 POLE3Q9NRF9 147 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 SPHK1Q9NYA1 384 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 CTSFQ9UBX1 484 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF337Q9Y3M9 751 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 GNB5O14775 395 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 LATO43561 262 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ADH5P11766 374 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 DLSTP36957 453 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ID2Q02363 134 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 LIPNQ5VXI9 398 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 LHX8Q68G74 356 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF425Q6IV72 752 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ULK3Q6PHR2 472 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM205Q6UW68 189 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 GABRG1Q8N1C3 465 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 CLEC1AQ8NC01 280 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR1S2Q8NGQ3 325 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 SERINC2Q96SA4 455 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF304Q9HCX3 659 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ASF1BQ9NVP2 202 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 FRRS1LQ9P0K9 344 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR10H1Q9Y4A9 318 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 BRCA2P51587 3418 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 A0A087WV62 115 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 IGLON5A6NGN9 336 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR52A4PA6NMU1 304 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 FAM171A2A8MVW0 826 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ARPC3O15145 178 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 B3GALT2O43825 422 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ADAM11O75078 769 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 RAB3DO95716 219 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ADH1AP07327 375 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 SLC35G6P0C7Q6 338 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 CD34P28906 385 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 BDKRB2P30411 391 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 P2RY2P41231 377 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 RPS15AP62244 130 aaKnown RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 EXOSC6Q5RKV6 272 aaKnown RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 NKAIN2Q5VXU1 208 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 DHRS7BQ6IAN0 325 aaPredicted RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 RAB12Q6IQ22 244 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 SLC16A9Q7RTY1 509 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ANKRD33Q7Z3H0 272 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF676Q8N7Q3 588 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR1J4Q8NGS1 313 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 NXPE3Q969Y0 559 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 RAB7BQ96AH8 199 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 LMAN2LQ9H0V9 348 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 OR1A2Q9Y585 309 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 TP53BP1Q12888 1972 aaPredicted RBP12.5□□□□□ -0.41
PTPRE-204ENST00000455661 DENND4AQ7Z401 1863 aa12.5□□□□□ -0.41
PTPRE-204ENST00000455661 TRAV8-7A0A075B6U6 113 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 A0A087WV48 116 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM72A0PK05 275 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 IMPA2O14732 288 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 UPK3AO75631 287 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 SLC25A12O75746 678 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 WNT11O96014 354 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 GPR143P51810 404 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 PLAURQ03405 335 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 SRSF4Q08170 494 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 BEX5Q5H9J7 111 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 LEG1Q6P5S2 330 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 THAP6Q8TBB0 222 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZCCHC10Q8TBK6 192 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM106AQ96A25 262 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 RASD2Q96D21 266 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 SCN3AQ9NY46 2000 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 EPHA6Q9UF33 1036 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 NOP16Q9Y3C1 178 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 A0A1B0GTI1 187 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 PRRT4C9JH25 899 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 MOSPD3O75425 235 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 SNAPINO95295 136 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms