RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CDK5R1Q15078 307 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 C10orf120Q5SQS8 335 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SAT2Q96F10 170 aaPredicted RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MRI1Q9BV20 369 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 WNT5BQ9H1J7 359 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SEMA6CQ9H3T2 930 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 TRPV4Q9HBA0 871 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 NOX4Q9NPH5 578 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 FAM86C1Q9NVL1 165 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 ZDHHC8Q9ULC8 765 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 KCNIP3Q9Y2W7 256 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3DA0A087WVF3 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3IA0A087WXS9 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3EA0A087X179 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3KA0A087X1G2 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 A0A0B4J2A0 478 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TEX13DA0A0J9YY54 714 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3FA6NER0 549 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3LB9A6J9 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 H7C1Q1 480 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OGG1O15527 345 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ZNF208O43345 1280 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 KCNAB3O43448 404 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TMEM127O75204 238 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 CLDN7O95471 211 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 F10P00742 488 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TGFB1P01137 390 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 IGLV3-27P01718 113 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TMIGD3P0DMS9 266 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 CALCBP10092 127 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 RNH1P13489 461 aaKnown RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 EDN3P14138 238 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 DAOP14920 347 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ITPKBP27987 946 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 NDUFA6P56556 154 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 RGS8P57771 180 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 HTRA3P83110 453 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 B4GALNT1Q00973 533 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ST3GAL3Q11203 375 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 PNLIPRP3Q17RR3 467 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TP53I3Q53FA7 332 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ACTBL2Q562R1 376 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 PRRT3Q5FWE3 981 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ZNF311Q5JNZ3 666 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SLC35D3Q5M8T2 416 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 PRAMEF17Q5VTA0 474 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SPRYD7Q5W111 196 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3CQ6IPX1 549 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 AGTRAPQ6RW13 159 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 NRMQ8IXM6 262 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 TBC1D3Q8IZP1 549 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 PAQR4Q8N4S7 273 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 AVL9Q8NBF6 648 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OR4K17Q8NGC6 315 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OR4K14Q8NGD5 310 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OR1J2Q8NGS2 313 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 MAFIPQ8WZ33 124 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OR5P2Q8WZ92 322 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SMPDL3AQ92484 453 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 DIO2Q92813 273 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SMIM8Q96KF7 97 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 F2RL3Q96RI0 385 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 C19orf43Q9BQ61 176 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 RIOK2Q9BVS4 552 aaKnown RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 TTTY10Q9BZA0 68 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ADAM19Q9H013 955 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 OR51V1Q9H2C8 321 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SMOC1Q9H4F8 434 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 BCO1Q9HAY6 547 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 ADGRL4Q9HBW9 690 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 NCDNQ9UBB6 729 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 SHPKQ9UHJ6 478 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 NOP16Q9Y3C1 178 aaKnown RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 ZFP37Q9Y6Q3 630 aaPredicted RBP7.88□□□□□ -1.15
LSM5-208ENST00000450169 V9GY05 133 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 NLRC5Q86WI3 1866 aa7.88□□□□□ -1.15
LSM5-208ENST00000450169 A0A1W2PNR3 127 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 OR52A4PA6NMU1 304 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 MKRN2OSH3BPM6 223 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 M0R036 132 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 AGPAT2O15120 278 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 MAGEB4O15481 346 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 CD3DP04234 171 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ARG1P05089 322 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 FCGR3AP08637 254 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 C5AR1P21730 350 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 AQP2P41181 271 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ADPRHP54922 357 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SLC26A5P58743 744 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ACTC1P68032 377 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ACTA1P68133 377 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 TNFRSF9Q07011 255 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 DHRS2Q13268 280 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 UPP1Q16831 310 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 LHX8Q68G74 356 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 LCTLQ6UWM7 567 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 NPSR1Q6W5P4 371 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms