RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EIF2B5Q13144 721 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ALKBH1Q13686 389 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 KIR2DS5Q14953 304 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 PRTGQ2VWP7 1150 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 DNM1P46Q6ZS02 220 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LRRTM1Q86UE6 522 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 OOSP2Q86WS3 158 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 C1orf216Q8TAB5 229 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LIPHQ8WWY8 451 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 PIGKQ92643 395 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 SLITRK2Q9H156 845 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 SEMA6CQ9H3T2 930 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 NOX3Q9HBY0 568 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TAS2R5Q9NYW4 299 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 PIPOXQ9P0Z9 390 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 NUP50Q9UKX7 468 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 POMT2Q9UKY4 750 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC6A5Q9Y345 797 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ZDBF2Q9HCK1 2354 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 HEATR5AQ86XA9 2040 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TMEM72A0PK05 275 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 METTL12A8MUP2 240 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 M0R233 179 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 SERPINI2O75830 405 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TPPPO94811 219 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TNFP01375 233 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CD14P08571 375 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 GIPP09681 153 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 IFNGR1P15260 489 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 MAOBP27338 520 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 AQP2P41181 271 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CXCL12P48061 93 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ART1P52961 327 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TAS2R20P59543 309 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TSPAN5P62079 268 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 FZD2Q14332 565 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF74Q16587 644 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LINC00303Q3SY05 128 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TCTE1Q5JU00 501 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC25A25Q6KCM7 469 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ATG4DQ86TL0 474 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF761Q86XN6 746 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 DND1Q8IYX4 353 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LSM14AQ8ND56 463 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 OR5AK2Q8NH90 309 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 C16orf52Q8NHV5 167 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LRRC20Q8TCA0 184 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 C15orf40Q8WUR7 153 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 KLHDC7BQ96G42 594 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 DGAT2Q96PD7 388 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CDCP1Q9H5V8 836 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TCF7L1Q9HCS4 588 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 GPR27Q9NS67 375 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TAS2R10Q9NYW0 307 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 MGAT4CQ9UBM8 478 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 KCNN3Q9UGI6 736 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF346Q9UL40 294 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 OR10H1Q9Y4A9 318 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 MYO15AQ9UKN7 3530 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 ELOA3DA6NLF2 546 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 OR5K4A6NMS3 321 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 B8ZZF3 427 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 I3L521 148 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 RPP14O95059 124 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 IL5P05113 134 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 CELA2BP08218 269 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 DCTDP32321 178 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 GRK6P43250 576 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 FUT7Q11130 342 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 ELOA3BQ3SY89 546 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 KLHL26Q53HC5 615 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 LIPNQ5VXI9 398 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 CDC20BQ86Y33 519 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF595Q8IYB9 648 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 ELOA3Q8NG57 546 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 THEM6Q8WUY1 208 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 TSSK2Q96PF2 358 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 PRTFDC1Q9NRG1 225 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 FRRS1LQ9P0K9 344 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 ERVK-19Q9WJR5 959 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 MRPS33Q9Y291 106 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 MAB21L2Q9Y586 359 aa14.9□□□□□ -0.02
CLCNKA-203ENST00000439316 LOC105371267A0A1B0GV96 52 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 BLACEA4D250 179 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 TUBAL3A6NHL2 446 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CDC123O75794 336 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 NDUFB6O95139 128 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 TXNDC12O95881 172 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 RRASP10301 218 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 PNMTP11086 282 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 PTHLHP12272 177 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CD27P26842 260 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 SDHAP31040 664 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 PGDP52209 483 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 AANATQ16613 207 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 FNDC7Q5VTL7 733 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF626Q68DY1 528 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 WBP2NLQ6ICG8 309 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 LRRN1Q6UXK5 716 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms