RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 DPP10Q8N608 796 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 SMYD1Q8NB12 490 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 OR6N1Q8NGY5 312 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 OR5J2Q8NH18 312 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 NEU4Q8WWR8 484 aaPredicted RBP10□□□□□ -0.81
SQSTM1-203ENST00000422245 MOGAT1Q96PD6 335 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 CGREF1Q99674 301 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 MCHR1Q99705 422 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 ARHGDIGQ99819 225 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 BPESC1Q9GZL8 116 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 DENND2DQ9H6A0 471 aaPredicted RBP10□□□□□ -0.81
SQSTM1-203ENST00000422245 MED29Q9NX70 200 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 FBXL3Q9UKT7 428 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 TRIM33Q9UPN9 1127 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 POFUT2Q9Y2G5 429 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 NDUFAF1Q9Y375 327 aa10□□□□□ -0.81
SQSTM1-203ENST00000422245 LOC100289279A0A1B0GTE1 492 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 PLPP3O14495 311 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 PHF1O43189 567 aaPredicted RBP9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 ENTPD5O75356 428 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 RAB36O95755 333 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 B4GALT1P15291 398 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF23P17027 643 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 SRD5A1P18405 259 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 HNF1AP20823 631 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 NR4A1P22736 598 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 AHCYP23526 432 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 GIFP27352 417 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 CSNK1A1P48729 337 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 MTPNP58546 118 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 RPS23P62266 143 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 KRT80Q6KB66 452 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 PATL1Q86TB9 770 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 PHC2Q8IXK0 858 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 TSPEARQ8WU66 669 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 CKAP2Q8WWK9 683 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 MSI2Q96DH6 328 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 FOXN4Q96NZ1 517 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 DOK1Q99704 481 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 FOXB1Q99853 325 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 WFDC6Q9BQY6 131 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 SIKE1Q9BRV8 207 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 EMC6Q9BV81 110 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF385DQ9H6B1 395 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 INTS9Q9NV88 658 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 B3GNT2Q9NY97 397 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 CMAHPQ9Y471 501 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 SPEF1Q9Y4P9 236 aa9.99□□□□□ -0.81
SQSTM1-203ENST00000422245 HMGB1P1B2RPK0 211 aaPredicted RBP9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 LRRN3E7EW58 273 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 SERPINI2O75830 405 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 UBL3O95164 117 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 OR6A2O95222 327 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 STAMBPO95630 424 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 OPN1SWP03999 348 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 ADORA3P0DMS8 318 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 CD79AP11912 226 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 DAOP14920 347 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 PCGF2P35227 344 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 EVX1P49640 407 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 CHN2P52757 468 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 CAMK2DQ13557 499 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 NFYCQ13952 458 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 NPTX1Q15818 432 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF74Q16587 644 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 TRMT5Q32P41 509 aaKnown RBP9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 INTS11Q5TA45 600 aaKnown RBP9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 NHLRC1Q6VVB1 395 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 RETREG3Q86VR2 466 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 CDK20Q8IZL9 346 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 GPR32P1Q8NGA4 272 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 OR6T1Q8NGN1 323 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 HPS1Q92902 700 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 MRPL24Q96A35 216 aaKnown RBP9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 TXNDC15Q96J42 360 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 MPP4Q96JB8 637 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 MAGEB18Q96M61 343 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 SLC19A3Q9BZV2 496 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 KAT8Q9H7Z6 458 aaKnown RBP9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 CHODLQ9H9P2 273 aa9.98□□□□□ -0.81
SQSTM1-203ENST00000422245 TRAPPC13A5PLN9 417 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 CPSF4LA6NMK7 179 aaKnown RBP9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 M0QX08 132 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 M0R233 179 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 TACSTD2P09758 323 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 IFNGR1P15260 489 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF14P17017 642 aaPredicted RBP9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 LSP1P33241 339 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 GIPRP48546 466 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 PTDSS1P48651 473 aaKnown RBP9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 BIDP55957 195 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 GALK2Q01415 458 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 SELPLGQ14242 412 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 DUSP7Q16829 419 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ENTPD8Q5MY95 495 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 FAM120AOSQ5T036 256 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 TTC33Q6PID6 262 aaPredicted RBP9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 WDR88Q6ZMY6 472 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms