RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CXXC5Q7LFL8 322 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ADGRE4PQ86SQ3 457 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZBTB46Q86UZ6 589 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 CPOQ8IVL8 374 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 TSPAN14Q8NG11 270 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR52E2Q8NGJ4 325 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZPLD1Q8TCW7 415 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ASB10Q8WXI3 467 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 GGHQ92820 318 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 MYDGFQ969H8 173 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 WDYHV1Q96HA8 205 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 Q96M85 177 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ALG12Q9BV10 488 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 FGF20Q9NP95 211 aaPredicted RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SCOCQ9UIL1 159 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF175Q9Y473 711 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 CNTRLQ7Z7A1 2325 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRSS37A4D1T9 235 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF814B7Z6K7 855 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 XKRYO14609 159 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 XPNPEP2O43895 674 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 BCL10O95999 233 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF43P17038 809 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ACVR2AP27037 513 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 FMO3P31513 532 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 MTNR1AP48039 350 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 STARP49675 285 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF133P52736 654 aaPredicted RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 BLVRAP53004 296 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF91Q05481 1191 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 LGALS3BPQ08380 585 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 POU4F2Q12837 409 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 BLMHQ13867 455 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 HIST3H3Q16695 136 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 GXYLT1Q4G148 440 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC35F1Q5T1Q4 408 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 IGFN1Q86VF2 1251 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF540Q8NDQ6 660 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 C9orf43Q8TAL5 461 aaPredicted RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC25A44Q96H78 314 aaPredicted RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 TEAD3Q99594 435 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 CDCA4Q9BXL8 241 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 PAK1IP1Q9NWT1 392 aaPredicted RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 H2AFY2Q9P0M6 372 aaPredicted RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 RCE1Q9Y256 329 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 EXOGQ9Y2C4 368 aaKnown RBP12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 FKBP7Q9Y680 259 aa12.72□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF716A6NP11 495 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 C11orf98E9PRG8 122 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 J3QRE1 110 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 M0R129 80 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 CDK1P06493 297 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 HTR1AP08908 422 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 NR2C1P13056 603 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 HLA-DOBP13765 273 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 IFNGR1P15260 489 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 TCEA1P23193 301 aaKnown RBP12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 DCKP27707 260 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 CRABP1P29762 137 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 CDH11P55287 796 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 MVKQ03426 396 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 NFATC3Q12968 1075 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 PLBD1Q6P4A8 553 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 B3GNT6Q6ZMB0 384 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 JAZF1Q86VZ6 243 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR9K2Q8NGE7 335 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR2T4Q8NH00 348 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 RNF128Q8TEB7 428 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 RASD2Q96D21 266 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 NMNAT3Q96T66 252 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 COPS4Q9BT78 406 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 DEFB127Q9H1M4 99 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 DNAJC27Q9NZQ0 273 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 AASSQ9UDR5 926 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 LIPGQ9Y5X9 500 aa12.71□□□□□ -0.37
SHMT1P1-201ENST00000419974 NCKAP5O14513 1909 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 SLC22A23A1A5C7 686 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 CCDC182A6NF36 153 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF724A8MTY0 619 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms