RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 NAA40Q86UY6 237 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 MISPQ8IVT2 679 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 SERPINA12Q8IW75 414 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CFAP206Q8IYR0 622 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CRYBG2Q8N1P7 616 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 AQP11Q8NBQ7 271 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TMEM185AQ8NFB2 350 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 OR52I1Q8NGK6 324 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 OR4L1Q8NH43 312 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 RXFP4Q8TDU9 374 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 UBTD2Q8WUN7 234 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PNPLA2Q96AD5 504 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CMTM7Q96FZ5 175 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 C12orf66Q96MD2 445 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PANX1Q96RD7 426 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TAAR1Q96RJ0 339 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 NIPSNAP1Q9BPW8 284 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 UTP23Q9BRU9 249 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 FAIM2Q9BWQ8 316 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TEX12Q9BXU0 123 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 EGLN1Q9GZT9 426 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 FZD8Q9H461 694 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 C19orf12Q9NSK7 152 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 RBM22Q9NW64 420 aaKnown RBP eCLIP4.97□□□□□ -1.612e-10■■■■■ 39.5
CLK1-202ENST00000409403 TMEM160Q9NX00 188 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TAS2R5Q9NYW4 299 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 DNAJC27Q9NZQ0 273 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ABRACLQ9P1F3 81 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 GALPQ9UBC7 116 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 GHRLQ9UBU3 117 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CLEC2DQ9UHP7 191 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CCL27Q9Y4X3 112 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ZNF638Q14966 1978 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 SPG11Q96JI7 2443 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 URB1O60287 2271 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 PTPRBP23467 1997 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SYNJ2BP-COX16A0A087WUM0 186 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OR6C68A6NDL8 312 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 WASH3PC4AMC7 463 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 PRRT4C9JH25 899 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 NPIPB9F8W1W9 429 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 BLOC1S5-TXNDC5H3BN57 136 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 H7C0S8 307 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 GABRPO00591 440 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 PGRMC2O15173 223 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ARPC5O15511 151 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 LRRTM2O43300 516 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ZNF749O43361 778 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OR1I1O60431 355 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SIX6O95475 246 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 VNN2O95498 520 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 MBPP02686 304 aaPredicted RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 MT-ND4LP03901 98 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 URODP06132 367 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 CD2P06729 351 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 KLK3P07288 261 aaPredicted RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 RPS2P15880 293 aaKnown RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 ABOP16442 354 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 GJA1P17302 382 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 PRPH2P23942 346 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 S100A2P29034 98 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 FAUP35544 74 aaKnown RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 PCP4P48539 62 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 POU3F4P49335 361 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 AGTR2P50052 363 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 CTSCP53634 463 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 C21orf58P58505 322 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 TAS2R50P59544 299 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 EIF5AP63241 154 aaKnown RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 FABP5Q01469 135 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 CFHR3Q02985 330 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 LAMTOR4Q0VGL1 99 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SERTAD2Q14140 314 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ZNF345Q14585 488 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ABRAXAS2Q15018 415 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 HMGN3Q15651 99 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ZNF239Q16600 458 aaKnown RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 SLC36A2Q495M3 483 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OTUD1Q5VV17 481 aaPredicted RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 ZNF626Q68DY1 528 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 H3F3CQ6NXT2 135 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SLC30A6Q6NXT4 461 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 IL34Q6ZMJ4 242 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 TMEM91Q6ZNR0 172 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 ABHD13Q7L211 337 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SLC29A4Q7RTT9 530 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 GRASPQ7Z6J2 395 aaPredicted RBP4.96□□□□□ -1.61
CLK1-202ENST00000409403 PTOV1Q86YD1 416 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SIAH3Q8IW03 269 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 NAGSQ8N159 534 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 LINC01465Q8N7H1 131 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 RNF149Q8NC42 400 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OR52B6Q8NGF0 335 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OR10Q1Q8NGQ4 319 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 OR1J4Q8NGS1 313 aa4.96□□□□□ -1.61
CLK1-202ENST00000409403 SLC7A13Q8TCU3 470 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms