RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ASB17Q8WXJ9 295 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 HAS2Q92819 552 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 IGHV3-64DA0A0J9YX35 117 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 ACOD1A6NK06 481 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 BCL6P41182 706 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF740Q8NDX6 193 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF286AQ9HBT8 521 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 BABAM2Q9NXR7 383 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 STEAP1Q9UHE8 339 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 TK1P04183 234 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 RPA2P15927 270 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF534Q76KX8 674 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC35F3Q8IY50 421 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 SGK3Q96BR1 496 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 PDLIM5Q96HC4 596 aaKnown RBP13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 UNKLQ9H9P5 680 aaKnown RBP13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 SPTY2D1-AS1A0A0U1RR47 76 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 SSX4O60224 188 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 NDUFB7P17568 137 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 KIR2DL3P43628 341 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 REEP5Q00765 189 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 MEF2DQ14814 521 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 OR13C9Q8NGT0 318 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 NOX3Q9HBY0 568 aa13.13□□□□□ -0.31
PCDHA11-201ENST00000398640 TSPAN11A1L157 253 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 LMO7DNF2Z398 122 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 TNFSF14O43557 240 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ITGB2P05107 769 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 CD1CP29017 333 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 BATFQ16520 125 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MPEG1Q2M385 716 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MISPQ8IVT2 679 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC7A13Q8TCU3 470 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 SGPP1Q9BX95 441 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 IL2RAP01589 272 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 TP53P04637 393 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 T-ENOLP0DO92 83 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 NMNAT3Q96T66 252 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 C20orf27Q9GZN8 174 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 PLCXD1Q9NUJ7 323 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 CLN5O75503 358 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ACP2P11117 423 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 KITLGP21583 273 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 F2RL1P55085 397 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 NCCRP1Q6ZVX7 275 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 RPS19BP1Q86WX3 136 aaKnown RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ARL11Q969Q4 196 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 DAZAP1Q96EP5 407 aaKnown RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF281Q9Y2X9 895 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 STMND1H3BQB6 276 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ARNTLO00327 626 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 PIP5K1CO60331 668 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 CLEC3BP05452 202 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ZFP90Q8TF47 636 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 GTF2H4Q92759 462 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 DHRS4Q9BTZ2 278 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MENTQ9BUN1 341 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 ACSS1Q9NUB1 689 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 GMDSO60547 372 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 UPK1BO75841 260 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 PIAS2O75928 621 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MAKP20794 623 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 TACR1P25103 407 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 EVI2BP34910 448 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 GFRALQ6UXV0 394 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 TRILQ7L0X0 811 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 CNTN4Q8IWV2 1026 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 MFFQ9GZY8 342 aa13.12□□□□□ -0.31
PCDHA11-201ENST00000398640 P2RY10O00398 339 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 GABRPO00591 440 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 OMGP23515 440 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 C12orf45Q8N5I9 185 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 SECTM1Q8WVN6 248 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 GGHQ92820 318 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 SELENOIQ9C0D9 397 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ENPP5Q9UJA9 477 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms